OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [M:0129] and [T:0139]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.5	1.5	0.5	1	0.6	0.7	-0.2	0.6	-0.1	-0.1	-0.3	-0.6	-0.1	-0.1	-0.1	-0.6	-1.1	-0.2	-0.4	0.6
F	-0.1	-0.2	-0.3	-0.1	0.3	-0.1	0	-0.1	0	0	0	0.4	0	0	0	-0.1	0.7	0	0	-0.2
I	-0.1	-0.3	-0.1	-0.6	0.6	-0.3	0.2	-0.4	0	0	0.3	-0.4	-0.1	-0.1	-0.1	0.5	0.3	0.3	-0.2	0.8
L	1.2	-0.8	-0.1	-0.3	0.1	-0.6	-0.2	-0.4	-0.1	-0.1	-0.2	-0.4	-0.1	-0.1	-0.1	1.9	0.3	0	1.7	-0.5
V	-0.2	-0.5	0.2	0.4	0.6	-0.2	-0.1	1.6	0	0	-0.1	-0.5	0	0	0	-0.3	0	-0.1	-0.3	-0.1
M	0.3	-0.4	-0.1	0.5	0.5	0	-0.1	-0.4	0	0	0.3	-0.2	-0.1	0	0	0.4	0.6	-0.2	-0.2	-0.2
W	-0.1	-0.1	-0.5	0.2	-0.7	0.4	0	-0.1	0	0	0	-0.1	0	0	0	-0.1	0.9	0	-0.1	0
Y	-0.1	-0.1	-0.3	0.2	0	0	0	0.4	0	0	0	-0.1	0	0	0	0	0.1	0	0	0
D	-0.2	0.2	0.3	-0.3	-0.2	-0.1	0	-0.1	0	0	0	-0.2	0	0	0	-0.2	-0.4	0	0	0
E	0	0	-0.2	0.3	-0.2	0	0	-0.1	0	0	0	0	0	0	0	0	-0.1	0	0	0
K	0	0	-0.1	-0.1	-0.2	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
R	0	0	-0.2	-0.1	-0.2	0	0	0	0	0	0	-0.1	0	0	0	0	-0.1	0	0	0
H	-0.2	-0.5	0.5	-0.1	-0.8	-0.2	0	-0.7	0	0	0	2.1	0	0	0	-0.2	0.3	-0.1	-0.1	0.3
N	-0.2	0.5	1.3	0.6	-0.1	-0.3	-0.3	0	-0.1	-0.1	-0.2	0.8	0	0	0	-0.6	0.1	0.3	-0.3	-0.4
Q	0	0	-0.2	-0.1	-0.2	0	0	0	0	0	0	0.2	0	0	0	0	-0.1	0	0	0
S	0	0.3	0.2	0.8	0.3	0.5	0.4	-0.3	0	0	-0.1	-0.4	0	0	0	-0.3	-0.8	-0.1	-0.1	-0.1
T	0.5	-0.4	0.4	-0.8	1.2	0.3	0	-0.2	0	0	0	0.1	0.2	0	0	-0.2	-0.4	-0.1	-0.1	-0.1
G	0.1	0.8	-0.6	-0.3	-0.3	0.2	0	0.3	0	0	-0.1	-0.3	0	0	0	-0.1	1	0	-0.1	-0.1
P	0	0	-0.1	-0.1	-0.2	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
C	-0.1	-0.1	0.4	-0.3	-0.1	0	0	0	0	0	0	0.2	0	0	0	0	-0.1	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0129	1.3	0	1.5	1.5	0.8	0.9	-0.7	-0.4	-0.2	-1	-1.2	-0.9	0.1	0.6	-1	0.6	0.3	0.8	-1.2	-0.6
0139	0.4	-0.2	1.8	1.6	1.8	0.2	-0.8	0	-1.1	-1.1	-0.8	0.6	-0.9	-1	-0.9	0	2	-0.7	-1.1	-0.3

Select residue pair below:

i_j	Score	Prob
0118_0129	4.419	1.00
0116_0129	1.150	0.97
0091_0129	1.103	0.96
0129_0139	0.941	0.89

Local Interactions:

i_j

Score

Prob

See all coupling residues
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