OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [V:0118] and [M:0129]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.3	1.4	0.4	1.2	-0.1	0.5	-0.2	-0.2	-0.3	-0.1	-0.1	-0.2	0.4	-0.6	0.2	-0.6	-0.2	-0.3	-0.1	-0.2
F	-0.2	-0.3	-0.7	0.5	0.5	1.4	1.4	0.1	-0.2	-0.1	-0.1	-0.1	-0.3	-0.9	-0.1	-0.4	-0.4	0.1	-0.1	0.3
I	0.9	-0.3	0.8	0.5	0	0.1	-0.2	-0.2	0	-0.1	-0.1	-0.1	-0.6	-0.3	-0.1	0.1	0.4	0	-0.1	-0.2
L	1.1	-0.4	-0.1	-0.2	0.3	-0.2	-0.2	-0.2	0.8	-0.2	-0.1	0.2	0.2	-0.4	-0.2	0.4	0.4	0.1	-0.1	-0.1
V	1.2	-0.2	0.6	1	0.4	0	-0.3	0.1	-0.4	-0.1	-0.1	-0.1	-0.4	-0.9	-0.1	0.5	-0.1	-0.4	-0.1	-0.2
M	0.1	-0.1	-0.1	-0.2	-0.4	0.5	-0.1	0.4	-0.1	0	0	0	0	-0.6	0	-0.1	0.2	0.3	0	0.4
W	-0.2	0	-0.1	0.5	-0.1	-0.1	0	0	0	0	0	0	0	-0.1	0	-0.1	-0.1	0	0	0
Y	1.3	0.1	-1	-0.8	0.5	-0.3	-0.1	0.1	-0.5	-0.1	-0.1	-0.1	-0.5	-1.4	-0.1	0.9	1.1	1.5	-0.1	-0.2
D	-0.4	0	-0.2	-0.5	-0.2	-0.2	0	0	-0.1	0	0	0	-0.1	2.1	0	-0.1	-0.2	-0.2	0	0
E	-0.2	0	-0.1	-0.2	0.4	-0.1	0	0	0	0	0	0	0	-0.2	0	0	-0.1	0	0	0
K	-0.1	0	-0.1	-0.1	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0	0	0
R	-0.1	0	-0.1	-0.1	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0	0	0
H	-0.4	-0.1	-0.3	-0.4	-0.2	0.2	0	0	0.4	0	0	0	-0.2	0.6	0	-0.1	-0.2	0.7	0	0
N	-1.1	-0.2	-0.6	-1.1	-0.3	-0.7	-0.1	-0.1	0.8	0	0	0	-0.3	4.3	0	0.2	-0.4	-0.5	0	-0.1
Q	0	0	-0.2	-0.3	-0.1	-0.1	0	0	0	0	0	0	-0.1	0	0	-0.1	0.2	0.4	0	0
S	-0.8	-0.1	0.9	-0.4	0.3	-0.1	-0.1	0.3	-0.1	0	0	0	-0.4	0.8	0	0	0.2	-0.3	0	-0.1
T	0.1	-0.2	-0.2	-0.3	0.3	-0.3	-0.1	-0.1	-0.1	0.3	0	0	2.7	-0.4	0	-0.2	-0.5	-0.3	0	-0.1
G	-0.2	0.1	-0.1	0.2	-0.1	-0.1	0	0	0	0	0	0	0	-0.1	0	0	-0.1	0	0	0
P	-0.6	0.6	0.7	0.8	-0.3	0.3	-0.1	-0.1	-0.1	0	0	0	-0.2	-0.4	0	-0.2	-0.2	-0.2	0	0
C	0.3	-0.1	1.1	0.6	-0.3	-0.4	-0.1	-0.1	-0.1	0	0	0	-0.2	-0.8	0	0.1	0	-0.2	0	0.3

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0118	1	0.9	1.4	1.7	1.1	0.1	-0.6	0.5	-0.3	-1	-1.1	-1.1	-0.3	-0.2	-0.6	-0.1	0.8	-0.9	0	-0.4
0129	1.3	0	1.5	1.5	0.8	0.9	-0.7	-0.4	-0.2	-1	-1.2	-0.9	0.1	0.6	-1	0.6	0.3	0.8	-1.2	-0.6

Select residue pair below:

i_j	Score	Prob
0118_0129	4.419	1.00
0116_0129	1.150	0.97
0091_0129	1.103	0.96
0129_0139	0.941	0.89

Local Interactions:

i_j

Score

Prob

See all coupling residues
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