OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [W:0104] and [Q:0107]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.8	-0.2	-0.5	-0.2	-0.4	-0.2	-0.3	0.2	0.1	0.1	-0.2	0.6	0.4	-0.1	-0.1	0.3	-0.3	0.5	0.5	-0.1
F	-0.8	-0.1	-0.1	-0.1	0	-0.1	0.4	-0.1	0.3	0.6	-0.9	0	0	0.9	-0.2	-0.3	1.1	-0.7	-0.2	-0.1
I	-0.1	-0.1	0.1	0.6	-0.2	-0.1	-0.1	-0.1	-0.7	0.1	0.4	-0.2	-0.1	0.1	1	-0.7	-0.4	0.7	-0.1	0
L	-0.4	-0.2	-0.2	0.5	-0.5	-0.1	-0.1	-0.2	0	0.5	-0.2	0.4	-0.3	-0.4	0.2	0.2	0.1	-0.3	0.7	0.3
V	0.1	0.3	-0.1	-0.3	-0.3	-0.1	-0.1	-0.2	-0.1	0	-0.2	0.1	-0.2	-0.5	0.1	0.4	0.6	0.6	-0.2	-0.1
M	-0.2	0	-0.1	-0.1	0.5	-0.1	0	-0.1	-0.5	0.1	0.6	-0.5	-0.1	-0.3	0.2	-0.3	0.9	-0.5	0.3	0
W	-0.3	-0.1	0.1	-0.3	0	0.2	-0.1	-0.2	1	0.1	0.2	-0.1	0	1	-0.3	-0.4	-0.3	0	-0.3	-0.1
Y	-0.5	-0.2	-0.2	-0.3	-0.3	-0.1	-0.1	0.2	0.3	-0.3	0	0	0.5	0.7	0.1	0	0.7	-0.1	-0.2	-0.1
D	0.4	-0.1	-0.1	0.3	0.3	-0.1	-0.1	-0.1	0.2	0	0.6	0.2	-0.2	-0.5	0.3	-0.3	-0.5	0	-0.3	-0.1
E	0.6	-0.2	0.5	0.1	0.1	-0.2	-0.1	-0.3	-0.5	-0.3	1.4	1.2	-0.1	0	-0.2	-0.7	-0.2	0	-0.4	-0.1
K	-0.4	-0.1	0.2	-0.2	0.4	0.3	-0.1	0.2	0.1	1.1	-0.5	-0.4	0.1	0.2	-0.1	0.3	0.1	-0.4	-0.3	-0.1
R	0.8	0.8	-0.1	-0.1	-0.2	-0.2	-0.1	-0.1	0.2	0.9	-0.1	0	-0.2	-0.3	0	0.2	-0.5	-0.3	-0.2	-0.1
H	0.3	-0.1	-0.1	-0.2	-0.3	-0.1	-0.1	-0.1	0	-0.4	-0.6	-0.1	0.4	-0.1	0.5	0.9	-0.6	0.6	0.1	-0.1
N	0.8	-0.1	-0.1	-0.1	0.4	0.4	0	0.3	-0.6	-0.2	-0.1	-0.2	-0.2	0.3	-0.5	0.9	0	-0.6	-0.1	0
Q	0.5	0.2	0.1	-0.3	0.1	-0.2	0.1	0.4	-0.4	-0.3	0.3	0.3	0.5	-0.2	0.1	-0.4	0.1	0.2	-0.2	-0.2
S	-0.6	-0.1	0.2	0.5	0.5	-0.1	-0.1	0.2	0.1	-0.4	-0.7	-0.4	-0.3	0	-0.1	0.3	0	0.5	0.2	0.3
T	0.5	-0.1	-0.1	0.2	-0.2	-0.1	-0.1	-0.2	-0.1	0	0	0	-0.3	0.1	0.2	0.3	0.2	0.1	-0.3	-0.1
G	-0.1	-0.1	-0.1	-0.1	0.3	0.3	0	-0.1	0.2	-0.6	0.4	-0.5	-0.1	-0.4	-0.3	-0.1	0	0.5	0.7	-0.1
P	-0.3	0	0	0	-0.1	0	0	0	0.9	0	0.1	-0.2	0	-0.1	-0.2	-0.2	-0.2	-0.2	0	0
C	-0.3	0	0	0	-0.1	0	0	0	-0.1	0	0.2	0.1	0	-0.1	0.4	0	-0.3	-0.1	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0104	1.8	-0.3	-0.5	0.4	-0.5	-0.6	-0.2	0.1	0.3	1	0.3	0.3	-0.1	0.2	0.8	0.6	0.4	0.1	-1.4	-1.3
0107	1.4	-1.2	-1	-0.8	-0.2	-1.3	-1.6	-1.1	1.2	1.8	1.5	0.6	-0.7	0.5	1.2	0.8	0.9	0.8	-0.7	-1.5

Select residue pair below:

i_j	Score	Prob
0104_0107	1.943	1.00
0051_0104	0.902	0.86
0061_0104	0.710	0.62
0104_0108	0.605	0.45

Local Interactions:

i_j

Score

Prob

See all coupling residues
Download raw data

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