OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [F:0051] and [W:0104]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.5	1.6	-0.4	0.6	-0.1	0.6	0.1	-0.6	0.2	-0.3	-0.1	0.2	-0.1	0.1	0.1	0.1	0.3	-0.5	-0.3	-0.3
F	0.2	-0.2	-0.3	-0.3	-0.4	-0.6	0.2	-0.2	0	0.4	0.4	1.4	0.1	-0.3	-0.2	-0.1	-0.4	0.2	-0.1	0.5
I	0.1	0	0.4	-0.6	0	0.1	1.3	0.2	-0.5	-0.1	-0.3	-0.3	0.6	-0.2	0.1	0.1	-0.6	-0.7	0.4	0.2
L	0.6	-0.1	0	0.7	0.2	0.2	-0.6	-0.6	0	0.1	0.3	0.1	-0.2	-0.6	0.7	0.7	0.6	-0.6	-0.3	0
V	0.6	-0.6	1.3	0.3	0.7	0	1	-0.1	-0.4	-0.3	-0.2	0	-0.8	-0.2	0	0	0.3	-0.4	-0.3	-0.1
M	0.7	-0.3	-0.2	-0.3	0.6	0.1	-0.4	-0.3	-0.2	0.6	-0.2	-0.2	-0.4	-0.1	0.2	-0.2	0.3	0.3	0.4	-0.1
W	0.2	-0.3	-0.3	0.1	-0.4	-0.2	-0.2	-0.3	1.7	0.5	-0.1	-0.5	-0.4	-0.4	0.6	0.2	-0.5	0.6	-0.1	-0.1
Y	-0.3	-0.1	-0.1	-0.2	-0.1	-0.1	-0.1	-0.1	0.3	0	-0.2	-0.2	-0.1	0.6	-0.2	0.2	0.6	-0.1	0	0
D	0	-0.1	-0.1	-0.2	-0.1	0	-0.1	0.3	-0.1	-0.2	0.3	-0.1	0.3	-0.1	-0.2	-0.1	-0.1	0.2	0	0
E	-0.5	-0.1	-0.1	-0.2	-0.1	-0.1	-0.1	-0.1	0.2	0.1	0.8	-0.2	-0.1	0.3	-0.3	-0.2	-0.2	0.6	0	0
K	-0.5	-0.1	0.6	-0.3	0	-0.1	-0.1	-0.1	0.3	0.2	0.1	0.2	-0.2	-0.1	0	-0.3	0.3	-0.2	0	0
R	0	-0.1	-0.1	0.4	-0.2	-0.1	-0.1	-0.1	0.6	0	-0.3	-0.2	-0.2	-0.1	-0.1	-0.2	0.4	0.2	0	0
H	0.3	-0.3	0.2	-0.5	-0.2	-0.1	-0.2	0.2	0.4	0.2	0.2	-0.3	-0.2	-0.1	-0.4	0.6	-0.3	0.2	-0.1	0
N	-0.6	-0.1	0.3	-0.2	0.2	-0.1	-0.1	-0.2	-0.2	-0.3	0.2	0.3	0.5	0.5	0.1	-0.2	-0.2	-0.2	0	0
Q	0.2	-0.1	-0.1	0.6	-0.1	0	0	-0.1	-0.1	-0.2	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0	0	0
S	0.2	0.5	-0.1	0.9	-0.3	-0.3	-0.4	0.5	-0.5	0.5	-0.5	0.1	-0.1	-0.3	0	0.1	-0.1	0.1	-0.1	-0.1
T	0.5	-0.2	-0.1	0.2	0.3	-0.3	-0.1	0.4	-0.5	0	-0.7	-0.5	0.6	0.3	0.5	0.2	0.5	-0.5	-0.2	-0.2
G	-0.3	-0.1	-0.1	-0.2	-0.1	-0.1	0.3	-0.2	-0.2	-0.6	-0.2	0.5	0.2	0.1	-0.2	-0.1	0.2	0.8	0	0
P	0.4	-0.6	-0.7	0	0.5	0.7	-0.5	-0.8	-0.8	0.1	0	0.1	1	0.6	0.5	0	-0.3	0.5	-0.2	0
C	-0.3	1	-0.1	-0.2	0.2	-0.1	-0.1	0.4	-0.1	-0.2	-0.2	-0.1	-0.1	0.3	-0.2	-0.1	-0.2	-0.1	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0051	1.1	0.7	1.7	1.7	1.3	0.1	0.4	-0.7	-0.7	-0.7	-0.6	-0.6	-0.6	-0.7	-1.1	-0.1	0.4	-0.7	0.5	-1
0104	1.8	-0.3	-0.5	0.4	-0.5	-0.6	-0.2	0.1	0.3	1	0.3	0.3	-0.1	0.2	0.8	0.6	0.4	0.1	-1.4	-1.3

Select residue pair below:

i_j	Score	Prob
0104_0107	1.943	1.00
0051_0104	0.902	0.86
0061_0104	0.710	0.62
0104_0108	0.605	0.45

Local Interactions:

i_j

Score

Prob

See all coupling residues
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