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Coupling matrix for [V:0080] and [V:0086]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.5 -0.5 0 -0.4 0.2 -0.1 0.7 0.3 0 -0.2 0.5 -0.2 -0.1 -0.3 -0.2 0.2 0.5 0.4 -0.2 -0.1
F 0.7 -0.2 -0.1 -0.7 0.3 -0.1 0.7 0.4 -0.2 -0.1 0.2 -0.3 -0.1 -0.2 -0.1 -0.2 0.2 -0.2 -0.2 0
I -0.2 -0.1 0.1 -0.6 0.3 -0.4 0 0.1 0.3 -0.2 -0.8 0.9 0.4 0.6 0.3 0.3 -0.6 0.2 1.2 -0.2
L 0.7 0.2 -0.2 -0.2 -0.5 0.2 1.5 0.2 0 0.1 -0.6 0.6 -0.2 -0.2 -0.3 -0.3 -0.7 -0.4 0.9 0.8
V 0.7 -0.7 -0.5 -0.6 0.6 0 -0.8 -0.7 1.6 0.5 -0.4 0.3 -0.1 0.1 -0.4 0.1 0.1 0.3 0.4 0.2
M -0.1 0.3 -0.3 -0.3 -0.1 0 0.1 -0.1 -0.1 0 -0.1 -0.1 0 1 0 0.1 -0.4 0 -0.1 0.2
W 0.3 0 -0.2 0.1 -0.3 0 -0.2 0 -0.1 0 -0.1 -0.1 0 -0.1 0 0.3 -0.2 -0.1 0.6 -0.1
Y 0.9 -0.2 0 -0.8 -0.4 -0.1 -0.1 -0.2 -0.3 0 -0.3 -0.1 0 -0.4 -0.1 0.2 0.8 -0.2 0 1.2
D -0.3 -0.1 0.1 0.8 0.2 -0.1 0.1 0.4 -0.1 -0.1 -0.2 -0.3 0 -0.2 -0.1 -0.3 0.9 -0.2 -0.4 -0.3
E -0.2 0.4 0.7 1.4 0.5 0.3 -0.4 -0.2 -0.2 -0.1 -0.2 -0.4 0 -0.3 -0.1 -0.7 -0.3 -0.2 -0.3 0.3
K -0.6 0.3 1.3 0.6 0 0.3 0.2 0.2 -0.2 -0.1 -0.3 -0.3 -0.1 0.1 -0.1 -0.3 -0.3 0.2 -0.3 -0.3
R 0.3 -0.1 0.3 1 -0.3 -0.1 -0.5 -0.2 0 -0.1 -0.2 -0.3 0 1.3 0.4 -0.1 -0.1 -0.1 -0.4 -0.4
H 0.4 0.4 -0.4 -0.1 -0.1 0 -0.2 -0.1 -0.1 0 0.2 -0.1 0 -0.2 -0.1 0.2 0.1 -0.1 0.1 -0.2
N -0.7 0.6 -0.3 0.2 -0.7 0 -0.3 0.3 -0.1 0 0.1 -0.1 0 -0.2 0 0.3 -0.5 0.7 -0.2 -0.1
Q -0.3 -0.1 0.4 0.4 0.2 0 0.3 -0.1 -0.1 0 -0.1 -0.2 0 -0.1 0 0.4 -0.5 -0.1 -0.1 -0.1
S -0.2 -0.2 -0.2 0.2 0.1 -0.1 -0.3 -0.1 -0.2 -0.1 1.1 0 0 -0.3 0 0.1 0.8 -0.2 -0.3 -0.2
T -0.1 0.1 -0.6 -0.7 0.2 -0.1 -0.1 -0.2 0.3 -0.2 0.9 0.8 0.1 -0.4 -0.1 0.3 0.5 -0.1 -0.5 -0.4
G -0.5 -0.1 0 -0.1 1 0 -0.2 -0.1 -0.1 0.4 -0.1 -0.1 0 -0.1 0 0.1 -0.3 -0.1 -0.1 -0.1
P 0 -0.1 -0.1 0.4 -0.3 0 -0.1 0 -0.1 0 -0.1 -0.1 0 -0.1 0.5 -0.1 -0.1 0 -0.1 -0.1
C 0.5 0 0.2 -0.2 -0.3 0 -0.2 0 -0.1 0 -0.1 -0.1 0 -0.1 0 0 0.6 -0.1 -0.1 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0080 1.3 0.1 1.6 1.8 1.7 -0.4 -0.8 -0.6 -0.4 0.2 -0.1 0.2 -0.4 -0.3 -0.5 0.1 0.3 -0.5 -1 -0.8
0086 1.6 -0.1 0.6 0.7 0.7 -0.8 0 -0.3 0 -0.8 -0.8 -0.4 -1 0.1 -0.8 1.1 1.3 -0.2 -0.4 -0.1
Select residue pair below:
i_j Score Prob
0080_0086 0.871 0.83
0080_0108 0.675 0.56
0080_0111 0.663 0.54
0080_0105 0.654 0.53
0059_0080 0.572 0.39
0080_0083 0.556 0.36
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...
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