OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [V:0080] and [G:0083]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	0	-0.1	0.3	0.2	0	0	-0.1	0.2	0.3	-0.1	0.2	-0.2	-0.1	-0.2	-0.2	-0.3	-0.1	0.3	-0.1
F	0.4	0	-0.1	-0.1	-0.1	0	0	-0.1	0.2	0	0.1	-0.1	-0.1	0.4	-0.4	0.2	-0.3	0.3	0	0
I	-0.2	-0.1	-0.4	-0.3	-0.1	-0.1	-0.1	0	0.9	0.3	0.3	0.5	-0.1	0.1	0	0.2	0.3	0.1	0.1	0.1
L	-0.1	-0.1	-0.2	0.2	0.2	-0.1	-0.1	0.2	0.3	0	-0.2	-0.1	0.5	0.3	0.3	0.1	0.2	0.1	-0.2	-0.2
V	-0.2	-0.2	-0.2	-0.3	-0.1	-0.2	-0.2	-0.3	0.8	0.2	-0.1	0.3	0	0.3	-0.1	0.2	0.4	0	0.2	0
M	-0.3	0	0.2	0	0.1	0	0	0	0.4	0.2	0.1	-0.2	0	0.1	-0.1	0	0.2	-0.2	-0.3	0
W	-0.2	0	0	0	0	0	0	0	-0.3	-0.3	-0.2	-0.2	0.4	-0.1	-0.1	0.7	-0.1	-0.1	0.2	0
Y	0	0	-0.1	-0.1	-0.1	0	0	0	0.4	0.5	0.3	-0.4	-0.1	0.3	-0.1	-0.1	-0.2	-0.1	-0.2	0
D	0.8	0	-0.1	0	-0.1	0	0	0	-0.4	-0.5	-0.4	-0.3	-0.1	-0.4	-0.2	-0.3	-0.3	1.7	0.2	0
E	0.3	0	-0.1	-0.1	-0.1	0	0	-0.1	-0.3	0.3	0	0.1	-0.1	0.1	0.1	-0.6	0.4	-0.6	0.2	-0.1
K	0.1	0.2	0.3	0.1	-0.1	0	0	-0.1	0.4	-0.1	-0.1	-0.1	-0.1	0.4	-0.2	-0.4	-0.5	-0.6	1.1	0
R	0.2	0	-0.1	-0.1	-0.1	0	0	0	-0.1	0.5	0	0.7	-0.1	0.1	0.3	0.3	-0.2	-0.1	-0.8	0
H	0	0	0	0	0	0	0	0	-0.3	0.5	0.3	-0.3	-0.1	-0.2	0.2	-0.1	-0.2	0.5	-0.2	0
N	-0.3	0	0	0	0	0	0	0	-0.5	-0.6	0.3	-0.1	0	-0.2	0.3	-0.1	-0.1	1.1	0.4	0
Q	-0.4	0	0	0	0	0	0	0	0	0	0.1	-0.2	0.1	-0.2	0.6	0.1	0.2	0.2	-0.5	0
S	-0.1	0	0.4	0	0	0	0	0	-0.4	-0.2	-0.1	0	-0.1	-0.1	0.3	0.1	0.1	-0.7	0.6	0
T	-0.2	0	-0.1	-0.1	-0.1	0	0	0	-0.1	0.2	0.2	0.3	-0.1	-0.3	-0.4	-0.1	0.1	0	0.1	0
G	0.1	0	0	0	0	0	0	0	0	-0.4	0.2	0.1	0.1	-0.2	-0.2	0.3	0.6	-0.5	-0.4	0
P	0.2	0	0	0	0	0	0	0	0	-0.2	0.1	-0.1	0	-0.1	-0.1	0.2	-0.1	-0.3	0.1	0
C	0.1	0	0.2	0	0	0	0	0	-0.2	-0.1	-0.2	-0.1	0	-0.1	0.2	0.3	-0.1	0.2	-0.3	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0080	1.3	0.1	1.6	1.8	1.7	-0.4	-0.8	-0.6	-0.4	0.2	-0.1	0.2	-0.4	-0.3	-0.5	0.1	0.3	-0.5	-1	-0.8
0083	0.3	-1.1	-0.8	-0.9	-0.9	-1.3	-1.3	-1	1.7	1.2	0.8	-0.4	-0.6	1	0.3	1.3	0.2	2.3	0.8	-1.1

Select residue pair below:

i_j	Score	Prob
0080_0086	0.871	0.83
0080_0108	0.675	0.56
0080_0111	0.663	0.54
0080_0105	0.654	0.53
0059_0080	0.572	0.39
0080_0083	0.556	0.36

Local Interactions:

i_j

Score

Prob

See all coupling residues
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