OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [L:0078] and [V:0247]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.4	0.4	0.1	0.8	0.4	0.1	-0.1	-0.3	0	0	0	-0.2	-0.2	0.2	0	-0.1	-0.1	-0.2	0	-0.2
F	0.1	0.9	0	0.3	0.1	-0.3	0.1	0.8	-0.1	-0.1	-0.2	-0.2	0.2	-0.2	-0.1	0.3	-0.2	0.5	-0.1	-0.7
I	-0.1	0.2	0.4	0.5	0.4	-0.2	-0.1	0	0	0	0	0	-0.2	-0.2	0	-0.1	0	-0.1	0	-0.1
L	-0.4	-0.4	0.9	0.3	1.6	0	-0.1	-0.2	0	0	-0.1	-0.1	-0.5	-0.2	0	-0.1	-0.1	-0.3	0	0.2
V	0.3	-0.1	0.6	0.1	0.3	0.8	-0.2	-0.1	0	0	-0.1	-0.2	-0.2	0.3	0	-0.1	-0.2	-0.1	0	-0.6
M	0.9	-0.4	1	-0.7	0.3	0	-0.1	-0.3	0	0	0	-0.1	-0.1	-0.1	0	-0.1	0	0.2	0	-0.3
W	-0.5	-0.3	-0.8	0.5	-0.7	0.1	-0.2	0.1	0	0	-0.1	0.1	1.3	-0.1	0	-0.1	0.2	0	0	1.3
Y	0.8	-0.1	-0.4	0.2	-1.4	0.2	0.2	0.9	-0.1	-0.1	-0.3	-0.3	-0.1	0.4	-0.1	0.2	0	0.3	-0.1	1
D	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
E	0	-0.1	-0.3	-0.1	0.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
K	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
R	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
H	0.1	-0.3	-0.2	-0.2	-0.2	-0.1	-0.1	-0.3	0	0	0.7	0.8	0.1	-0.1	0	-0.1	0.3	-0.2	0	-0.2
N	0	0	-0.1	0.2	-0.2	0	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0
Q	-0.1	0.3	0	-0.3	-0.4	0	0	0.3	0	0	0	0	0	0	0	0	0	0.2	0	-0.1
S	-0.1	0.2	-0.3	-0.1	0	0	0.5	-0.1	0	0	0	0	-0.1	0	0	0	0	0	0	-0.1
T	-0.1	-0.1	1	-0.7	0.2	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	-0.1	0	-0.1
G	-0.1	-0.1	-0.2	0.1	0.2	0	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	-0.1
P	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
C	-0.2	0.4	-0.3	0	0.1	0	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0078	0	1.8	0.3	0.9	1	0.4	1.4	2.2	-0.8	-0.8	-0.8	-0.8	0	-0.7	-0.6	-0.3	-0.5	-0.4	-0.8	-0.5
0247	0.2	1	1.8	1.1	0.5	0.4	-0.3	0.8	-0.8	-0.8	-0.5	-0.4	0.2	-0.3	-0.8	-0.3	-0.3	0.2	-0.8	-0.5

Select residue pair below:

i_j	Score	Prob
0078_0105	1.962	1.00
0078_0086	1.282	0.99
0078_0088	0.696	0.60
0078_0247	0.666	0.55
0078_0249	0.627	0.48
0078_0108	0.622	0.47
0059_0078	0.618	0.47
0078_0101	0.605	0.45

Local Interactions:

i_j

Score

Prob

See all coupling residues
Download raw data

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