OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [L:0078] and [I:0101]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.7	1.2	0.4	-1.1	0.2	0.2	0.9	-0.3	-0.1	-0.2	-0.1	-0.2	0.2	-0.2	-0.2	-0.2	0.5	-0.1	0	-0.2
F	0.7	-0.2	0.4	0.4	0.1	0.5	-0.6	0.4	-0.3	0.4	-0.2	-0.2	-0.5	0	0.1	0	-0.3	-0.1	-0.1	-0.4
I	-0.4	0.1	0.3	0.8	1.1	-0.3	-0.3	-0.3	-0.1	-0.1	-0.1	0.3	-0.1	-0.1	-0.2	-0.1	-0.2	0.2	0	-0.1
L	-0.1	-0.1	0.8	0.4	0.2	0.7	0.8	-0.5	-0.1	-0.3	-0.2	0.7	-0.3	-0.2	-0.4	0	0.1	-0.3	-0.1	-0.2
V	-0.3	0.2	0.7	0.7	0.9	0	-0.4	-0.5	0.5	-0.3	-0.1	-0.2	-0.3	-0.2	0.1	-0.2	0.2	-0.2	-0.1	0.3
M	0.2	0	-0.1	0.4	0.1	-0.2	0.6	0.6	-0.1	-0.1	-0.1	-0.1	-0.1	0.3	-0.2	-0.1	-0.3	-0.1	0	-0.1
W	0.5	-0.7	-0.6	-0.2	-1.1	-0.3	-0.1	0.6	-0.1	0.3	0.6	-0.2	1.3	0.4	0.5	0.1	-0.5	0.1	-0.1	0.7
Y	0.5	-0.2	0.2	-0.4	0.5	-0.1	-0.2	-0.1	-0.1	0.2	-0.2	0	-0.3	-0.4	0	0	0.8	-0.1	-0.1	0
D	0	0	-0.1	-0.2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
E	0	-0.1	-0.3	0.3	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
K	0	0	-0.1	-0.2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
R	0	0	-0.1	-0.2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
H	0.6	0.2	-0.5	-0.9	-0.5	-0.1	-0.2	0.5	0	0.1	0	0	-0.1	0.3	0.3	0.1	-0.1	0.5	0	0
N	0	0	-0.1	0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Q	-0.1	-0.1	0.1	0.1	-0.1	-0.2	0	0	0	0	0	0	0	0	0	0.2	0	0	0	0
S	-0.1	0	-0.3	-0.1	0.1	0.6	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0
T	-0.1	-0.2	-0.2	0.7	-0.2	-0.2	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0
G	-0.2	0.3	0.3	0	-0.3	0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	-0.1	0	0	0
P	0	0	-0.1	-0.2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
C	-0.1	-0.1	0.1	0.3	-0.2	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0078	0	1.8	0.3	0.9	1	0.4	1.4	2.2	-0.8	-0.8	-0.8	-0.8	0	-0.7	-0.6	-0.3	-0.5	-0.4	-0.8	-0.5
0101	0.8	0.5	1.5	1.5	0.9	0.8	0.2	0.4	-0.8	-0.3	-0.6	-0.3	-0.7	-0.4	-0.3	-0.6	-0.3	-0.3	-1	-0.2

Select residue pair below:

i_j	Score	Prob
0078_0105	1.962	1.00
0078_0086	1.282	0.99
0078_0088	0.696	0.60
0078_0247	0.666	0.55
0078_0249	0.627	0.48
0078_0108	0.622	0.47
0059_0078	0.618	0.47
0078_0101	0.605	0.45

Local Interactions:

i_j

Score

Prob

See all coupling residues
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