OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [F:0046] and [G:0047]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.8	0	-0.2	0	0.2	-0.3	-0.2	-0.4	0.1	0.4	0.2	0.1	0	0.1	0.1	0.1	0.3	-0.1	0.2	-0.2
F	0.8	-0.3	-0.1	0.1	0.2	0.1	0	0	-0.2	-0.3	-0.3	-0.2	-0.1	-0.1	-0.1	-0.3	0.1	0.7	-0.2	0
I	-0.4	0	-0.1	-0.2	-0.1	0.1	0	-0.4	-0.3	-0.4	1.2	-0.2	-0.1	0.6	-0.2	0	0	0.2	0.3	0
L	-0.3	-0.1	-0.3	0.3	-0.4	-0.2	-0.1	-0.6	0	-0.1	-0.2	0.7	0.2	0	0	-0.1	-0.2	0.3	1.2	-0.1
V	-0.2	-0.9	-0.2	0.7	-0.8	-0.1	-0.1	-1.1	0.6	0	0.4	1.1	0.3	0	0.1	-0.8	-0.3	0	0.6	-0.2
M	-0.4	-0.3	0.1	0.3	0.2	-0.2	0	-0.6	-0.2	-0.3	-0.2	-0.2	-0.1	0.4	-0.3	0.9	0.2	-0.3	0.6	-0.1
W	-0.3	-0.2	-0.1	-0.1	-0.2	-0.1	0	-0.2	-0.2	2.1	-0.2	-0.1	0	-0.1	-0.1	-0.2	-0.2	0	-0.3	0
Y	0.9	0.1	-0.1	-0.2	-0.2	-0.1	0	0	-0.2	-0.3	0.1	-0.2	-0.1	-0.1	-0.1	0	-0.3	0.6	-0.4	0
D	-0.7	-0.3	0.6	0.4	0.1	-0.4	-0.1	1.4	-0.1	0	0.2	0.5	-0.1	-0.2	-0.4	-0.2	0	0.6	-0.1	-0.2
E	-0.5	0.6	-0.2	0.5	-0.3	-0.1	0.3	0.3	0	-1.1	1.3	-0.1	0.1	0.2	0.3	-0.1	0.1	-0.2	-0.4	0.2
K	0.3	-0.3	0.1	-0.3	0.9	-0.2	-0.1	0.2	0.1	-0.4	-0.2	-0.4	0	-0.3	0	-0.1	0.3	0.5	0.2	-0.1
R	-0.8	0.4	0.6	0	1.1	0.1	-0.1	0.6	-0.2	-0.1	-0.5	-0.2	-0.2	0.1	-0.1	-0.2	0	-0.5	-0.4	0.3
H	-0.5	0.2	0.6	0.1	0.7	-0.1	0	-0.1	-0.4	-0.4	0.2	-0.2	-0.1	-0.2	0.2	0.2	0.1	-0.1	0	0
N	0	0.1	-0.3	-0.7	-0.1	0.1	-0.1	0.6	0.1	0.1	-0.2	-0.2	-0.2	0.3	0.1	0.6	0.6	-0.3	-0.2	-0.1
Q	0.5	1.1	0	-0.3	-0.1	-0.3	-0.1	0.4	0.1	0	-0.7	-0.1	0.1	-0.4	0.2	0.4	0	0.2	-0.1	-0.1
S	0.3	-0.4	-0.3	0.1	0	-0.5	-0.2	0.5	0.7	0.7	-0.1	0.1	0.3	0.8	-0.4	0.1	0.3	-0.6	-0.4	-0.2
T	0.2	0.4	-0.5	-0.5	0.6	-0.4	0.3	0.7	0.3	0.2	-0.6	0.2	-0.3	-0.1	0.6	0.1	0	-0.1	-0.2	-0.1
G	0	0.7	-0.4	0.6	-0.2	-0.3	-0.1	0.1	0	0.4	-0.1	-0.3	0.1	-0.1	0.2	0.2	-0.1	-0.4	0.2	-0.1
P	0.9	0	0.1	-0.3	-0.5	-0.2	-0.2	-0.4	0.6	0.9	0.1	-0.1	-0.5	-0.8	0.3	0	-0.2	0.6	0.3	0.3
C	-0.2	0.3	0	-0.1	-0.1	0	0	-0.1	-0.1	-0.1	-0.1	-0.1	0	0	-0.1	-0.1	0.3	-0.1	-0.2	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0046	1.4	-1	-0.6	0.3	0.5	-0.5	-1.6	-1.1	0.8	0.9	0.1	0	-0.6	0.4	0.1	1.4	0.9	0.6	1	-1.7
0047	0.7	0.3	-0.5	0.1	0.2	-0.6	-1.9	0.7	0.5	0.8	0.5	0.1	-1	-0.3	-0.2	0.8	0.5	0.7	0.9	-1.8

Select residue pair below:

i_j

Score

Prob

Local Interactions:

i_j	Score	Prob
0046_0047	0.957	0.90
0044_0046	0.637	0.50
0045_0046	0.589	0.42

See all coupling residues
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