OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [R:0045] and [F:0046]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.3	0	0.1	-0.4	0.6	-0.4	-0.2	0	0.2	0.5	-0.1	0.3	-0.1	-0.6	0.9	-0.7	0.2	0.5	-0.1	-0.1
F	0.4	-0.1	-0.2	-0.1	-0.3	-0.2	-0.1	-0.1	0.9	0.2	-0.4	0	-0.2	-0.3	0.7	-0.1	0.3	-0.1	-0.3	0
I	-0.2	0.3	-0.2	-0.4	0.2	-0.1	-0.1	-0.1	0.1	0.1	-0.3	-0.2	-0.2	0.7	-0.3	0.6	-0.1	0.1	0.1	0
L	0.4	-0.3	-0.3	-0.2	-0.2	-0.2	-0.1	-0.2	0.6	-0.1	0	0.1	-0.4	0.2	-0.2	0.4	0	0.5	0.1	-0.1
V	0.2	-0.1	0.1	0.1	0.3	-0.3	-0.1	0.2	-0.3	-0.1	-0.5	0.1	-0.3	0.1	-0.1	0.3	0.2	0.6	-0.3	0.4
M	0	-0.1	0.1	-0.1	-0.5	0.1	-0.1	-0.2	-0.2	0.1	0	-0.3	-0.2	0.3	-0.2	0.6	0.4	0.2	-0.1	-0.1
W	0.1	-0.1	-0.1	-0.3	-0.3	-0.1	0	-0.1	0.2	-0.3	0.4	0	-0.1	0	0.8	-0.3	0	-0.4	0.4	0
Y	0.3	0	-0.1	-0.2	0	-0.1	0	-0.1	0.2	0	-0.2	-0.1	-0.1	-0.2	0.2	-0.1	0	0.2	0	0
D	-0.2	-0.2	0.1	0.2	0.2	1.2	-0.1	0.2	-0.1	0.1	0.1	-0.4	-0.2	0.8	-0.3	-0.4	-0.2	0	-0.3	-0.1
E	0.1	-0.2	0	0.3	0	0.1	0.2	0.2	-0.4	0.3	0.4	-0.2	-0.3	-0.6	-0.3	0	0.9	0.2	-0.2	-0.1
K	-0.9	-0.1	0.6	-0.2	0.8	-0.2	-0.1	0.3	0.3	-0.6	0.5	-0.3	0.8	0	-0.4	-0.1	0.6	-0.3	-0.3	0
R	-0.2	0.7	0.2	-0.1	0	-0.2	-0.1	-0.1	-0.2	0.1	-0.4	1	0	0.2	-0.4	0.2	-0.4	-0.2	0	0
H	0.3	-0.1	-0.1	0.5	-0.4	-0.1	0	-0.1	0.1	-0.2	-0.2	0.1	0.1	-0.2	0.2	0.2	-0.4	-0.3	0.2	0
N	-0.6	-0.1	-0.2	0	-0.4	-0.2	-0.1	-0.1	-0.5	0.1	1.1	-0.4	-0.2	0.8	0.7	0.2	0.1	-0.1	0.2	0
Q	0.1	-0.2	0.4	0.3	-0.1	-0.3	-0.1	-0.2	-0.4	0.3	0.5	-0.3	0.1	-0.2	0.3	0.3	-0.1	-0.1	0.3	-0.1
S	0.5	0.1	-0.1	0.6	0.8	0.2	-0.1	-0.2	0	-0.3	0	-0.5	0.3	0.1	-0.6	0.1	-0.3	-0.3	0.5	-0.1
T	0.4	-0.1	0.1	0.3	-0.3	-0.3	-0.1	0.3	-0.3	0.3	-0.4	-0.3	0.1	-0.5	-0.1	0.3	0.2	0	0.6	0
G	-0.2	0.2	0.1	0	-0.6	0.5	-0.1	0.2	0	0.1	0.1	0.2	0.5	0	-0.5	0	-0.3	0	0.1	-0.1
P	0	0	-0.2	0.5	1	-0.3	-0.1	-0.2	0.6	-0.4	0.4	0.6	-0.3	-0.1	-0.3	-0.2	-0.2	0.1	-0.3	-0.1
C	0.1	0	0	-0.1	-0.1	0	0	0	-0.2	0.2	-0.1	-0.1	0	-0.1	-0.1	0.2	-0.1	0	-0.2	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0045	1	0	-0.2	0.9	0.1	-0.6	-0.8	-0.7	0.3	0.5	0.5	0.1	-0.8	0	0.8	0.6	-0.1	0.2	0.6	-1.3
0046	1.4	-1	-0.6	0.3	0.5	-0.5	-1.6	-1.1	0.8	0.9	0.1	0	-0.6	0.4	0.1	1.4	0.9	0.6	1	-1.7

Select residue pair below:

i_j

Score

Prob

Local Interactions:

i_j	Score	Prob
0046_0047	0.957	0.90
0044_0046	0.637	0.50
0045_0046	0.589	0.42

See all coupling residues
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