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prmt5 elegans 1-300 42-297 Return to Main Page
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Coupling matrix for [W:0217] and [E:0220]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
F 0 0 0 0 0 0 0 0 0 0.2 0 0 0 0 0 0 0 0.6 0 0
I 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
L 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
V 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
M 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
W -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.1 1.7 -0.1 -0.1 -0.1 -0.1 0.1 -0.1 -0.1 -0.1 -0.1 -0.1
Y 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
D 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
E 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
K 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
R 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
H 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
N 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
Q 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
S 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
T 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
G 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
P 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
C 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0217 -0.1 0.8 -0.1 -0.1 -0.1 -0.1 1.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1
0220 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 1.3 -0.1 -0.1 -0.1 -0.1 0.1 -0.1 -0.1 0.5 -0.1 -0.1
Select residue pair below:
i_j Score Prob
0217_0220 1.554 0.85
0110_0217 1.061 0.45
0217_0221 1.013 0.41
0179_0217 0.958 0.36
0205_0217 0.777 0.21
Local Interactions:
i_j Score Prob
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Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: E A A N S ...
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