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prmt5 elegans 1-300 42-297 Return to Main Page
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Coupling matrix for [A:0167] and [L:0222]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 -0.3 0.5 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F 0 0 -0.3 0 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I 0 0 0.7 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L 0 0 -0.1 -0.2 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
V 0 0 0.8 -0.1 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
M 0 0 -0.2 -0.4 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0 -0.1 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 0.6 0 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 0.3 0.5 -0.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 -0.2 0.4 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 -0.1 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0 -0.1 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 0.1 -0.3 0.6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 0 0 -0.1 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 0 0.2 0.3 -0.1 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T 0 0 -0.3 0 0.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G 0 0 0.3 0.3 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 -0.3 -0.3 0.6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 -0.3 0.1 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0167 0.7 -0.2 0.2 -0.2 0.3 -0.6 -0.9 -0.7 0.7 0.2 -0.3 -0.8 -0.7 0.2 -0.1 0.8 0.2 0.4 -0.1 -0.4
0222 -0.2 -0.2 1.2 0.4 1.8 -0.1 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2
Select residue pair below:
i_j Score Prob
0222_0253 2.719 1.00
0222_0236 1.197 0.59
0156_0222 1.079 0.47
0222_0230 1.039 0.43
0075_0222 0.870 0.28
0167_0222 0.858 0.27
0074_0222 0.851 0.27
Local Interactions:
i_j Score Prob
0221_0222 0.876 0.29
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: E A A N S ...
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