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prmt5 elegans 1-300 42-297 Return to Main Page
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Coupling matrix for [L:0111] and [V:0151]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0.1 0.5 -0.1 -0.2 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
F 0.4 -0.1 0.2 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I -0.4 0.7 0.4 0.4 0.2 0.2 0.1 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1
L 0.2 -0.1 0.6 0.5 0.6 0.3 -0.4 0.8 0.2 -0.1 -0.1 -0.2 -0.1 -0.1 -0.2 -0.1 0.2 -0.1 -0.1 -0.1
V 0.3 1 -0.1 0.1 0.2 -0.2 0.5 -0.3 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 -0.1 -0.1
M -0.1 0.2 0.3 -0.2 0.2 0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
W 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 -0.1 -0.1 0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T -0.1 -0.1 -0.1 0 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 -0.2 -0.2 0.9 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0111 0.3 -0.1 1.6 2.2 2.2 0.4 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.3 -0.5 -0.5 -0.5 -0.2 -0.5 -0.5 0.1
0151 0.2 1.1 1.4 1.3 1.1 0.1 0 -0.2 -0.3 -0.5 -0.5 -0.3 -0.5 -0.5 -0.3 -0.5 -0.3 -0.5 -0.5 -0.5
Select residue pair below:
i_j Score Prob
0077_0151 0.956 0.35
0111_0151 0.923 0.32
0151_0165 0.897 0.30
0151_0155 0.877 0.29
0151_0243 0.791 0.22
Local Interactions:
i_j Score Prob
0149_0151 0.868 0.28
See all coupling residues
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Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: E A A N S ...
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