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prmt5 elegans 1-300 42-297 Return to Main Page
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Coupling matrix for [F:0040] and [T:0121]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 -0.1 0 0.3 -0.1 0.3 0 0.4
F 0.7 -0.2 0 -0.1 0.4 -0.1 -0.1 -0.3 0.2 -0.1 -0.4 -0.1 -0.3 0.1 -0.2 0.7 0.7 0.4 -0.1 0.1
I -0.1 0 0 0 0 0 0 0.1 0 0 0 0 0.1 0 0 0 0 -0.1 0 0
L 0.1 0.2 0 0 -0.1 0 0 -0.2 -0.1 0 -0.1 0 0.2 0.6 0 -0.1 -0.1 -0.2 0 -0.1
V -0.1 -0.1 0 0 0 0 0 0.2 0 0 -0.1 0 -0.1 -0.2 -0.1 0.1 -0.1 1 0 -0.1
M -0.3 0.3 -0.1 -0.1 -0.1 -0.1 -0.1 0.7 -0.1 -0.1 -0.2 -0.1 0.6 0.7 0.2 -0.1 0.1 -0.3 -0.1 -0.2
W -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
Y 0.5 0 0 0 -0.1 0 0 -0.1 -0.1 0 0.8 0 -0.2 -0.2 0.3 0 0.1 -0.3 0 -0.2
D -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
E -0.2 0 0 0 0 0 0 0 0 0 0.4 0 -0.1 -0.1 0 -0.1 0.3 -0.1 0 0
K -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
R -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
H -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
N -0.1 0 0 0 0 0 0 0 0 0 -0.1 0 0.3 0 0 -0.1 -0.1 -0.1 0 0
Q -0.1 0 0 0 0 0 0 0 0 0 -0.1 0 0.4 -0.1 0 -0.1 -0.1 -0.1 0 0
S -0.1 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 0.6 0 0
T -0.1 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 -0.1 0 -0.1 0.3 -0.2 0 0.4
G 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1 0 0
P -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
C -0.1 0 0 0 0 0 0 0 0 0 0.4 0 -0.1 -0.1 0 0.1 -0.1 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0040 0.2 1.9 -0.4 0.2 0.4 1.1 -0.5 0.7 -0.5 -0.1 -0.5 -0.5 -0.5 -0.3 -0.3 -0.1 -0.1 -0.1 -0.5 -0.1
0121 -0.2 0 -0.3 -0.4 -0.1 -0.4 -0.4 0.2 -0.2 -0.4 0.2 -0.4 0.4 0.7 -0.1 0.8 0.9 0.7 -0.4 0.1
Select residue pair below:
i_j Score Prob
0040_0120 1.102 0.49
0040_0152 1.072 0.46
0040_0187 0.863 0.28
0034_0040 0.835 0.25
0040_0121 0.820 0.24
Local Interactions:
i_j Score Prob
See all coupling residues
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Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: E A A N S ...
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