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prmt5 elegans 1-300 42-297 Return to Main Page
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Coupling matrix for [M:0012] and [Q:0154]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F 0.4 0 0 0.2 0 0 0 0 0 0 0 -0.1 -0.1 0 -0.1 -0.1 0 0 0 0
I 0 0 0 0 0 0 0 0 0 0 0 -0.1 0.4 0 -0.1 0 0 0 0 0
L 0 0 0 0.3 0 0 0 0 0 -0.1 0 -0.1 -0.1 0 0.5 -0.1 0 0 0 0
V 0 0.2 -0.1 -0.1 -0.1 0 -0.1 0 0 -0.1 -0.1 0.2 -0.1 0 0.1 -0.1 0 0 0 0
M 0 0.4 -0.1 0.1 -0.1 0 0 0 0 -0.1 -0.1 -0.2 -0.1 0 0.5 -0.1 0 0 0 0
W 0 0 0 0.3 0 0 -0.1 0 0 -0.1 0 -0.2 0.3 0 0.2 -0.1 0 0 0 0
Y 0 -0.1 0 -0.1 -0.1 0 0.1 0 0 0.7 -0.1 -0.3 -0.2 0 0.3 -0.1 -0.1 0 0 -0.1
D 0.1 -0.1 0.1 -0.4 0.5 -0.1 -0.2 -0.1 -0.1 -0.3 0.3 0.1 0.4 -0.1 0.1 -0.2 -0.2 0.2 -0.1 -0.1
E -0.1 0.3 -0.1 -0.2 -0.1 -0.1 -0.2 -0.1 -0.1 -0.2 0.4 1.4 -0.5 -0.1 -0.5 -0.2 -0.1 -0.1 0.2 0.3
K -0.1 -0.1 0 -0.1 -0.1 0 0 0 0 -0.1 0 -0.2 -0.2 0 -0.2 1.1 0 0 0 0
R -0.1 -0.1 0 -0.1 0 0 -0.1 0 0 -0.1 0 -0.3 0.1 0 -0.2 0.6 0.3 0 0 0
H -0.2 -0.2 0.3 0.4 0 0.2 1 0.1 -0.1 0.1 -0.2 -0.8 0.7 0 0.2 -0.4 -0.3 -0.1 -0.1 -0.1
N 0 -0.1 0 0.3 0 0 0 0 0 0.3 -0.1 -0.3 0.2 0 0.2 -0.1 -0.1 0 0 0
Q 0 0 0 -0.1 0 0 0 0 0 0 0 0.2 0.2 0 -0.2 -0.1 0.4 0 0 0
S 0 0 0 0 0 0 0 0 0 -0.1 0 0.1 -0.1 0 -0.1 0 0.4 0 0 0
T 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G 0 0 0 -0.1 0 0 -0.1 0 0 -0.1 -0.1 0.8 0.2 0 -0.2 -0.1 -0.1 0 0 0
P 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0.3 -0.1 0 0 0 0
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0012 -0.3 0 -0.1 0.1 0.1 -0.1 0.1 0.6 -0.2 0 -0.1 0 0 0.2 0.2 -0.1 -0.3 0.3 -0.1 -0.3
0154 -0.4 -0.1 -0.2 1 0 -0.3 0.1 -0.6 -0.8 0.1 -0.1 1.1 1 -0.7 1.3 0.5 -0.2 -0.6 -0.6 -0.6
Select residue pair below:
i_j Score Prob
0125_0154 1.179 0.57
0012_0154 0.929 0.33
0085_0154 0.818 0.24
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: E A A N S ...
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