May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
PRMT5 1-300 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [Y:0179] and [E:0182]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 -0.1 -0.2 0 0.1 -0.1 -0.1 -0.1 0 -0.1 0.3 -0.1 -0.1 -0.1 -0.1 0.1 -0.1 0.4 0 0
F -0.1 0 0 -0.1 -0.1 0 0 0 0.2 -0.1 0 0 0 0 0 0 0 0 -0.1 0
I -0.2 -0.1 0.1 -0.3 -0.1 -0.1 0.4 -0.1 0.5 -0.2 -0.1 0 0 0.2 -0.1 -0.1 -0.1 0 0.2 0
L -0.2 -0.1 -0.2 -0.3 0 0.3 0.3 -0.1 0.4 0.6 -0.1 0 -0.1 0.2 -0.2 0 -0.2 -0.1 0.1 -0.1
V 0.1 -0.1 -0.2 0.8 0.1 -0.1 -0.1 -0.1 -0.2 0 -0.1 -0.1 -0.1 -0.1 0.8 -0.2 -0.1 -0.1 -0.1 0
M -0.1 0 -0.1 -0.2 -0.1 0 0 0.5 -0.1 -0.1 0 0 0 -0.1 -0.1 -0.1 0.1 0 0.2 0
W 0 0 0 -0.1 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0
Y -0.1 0 -0.1 0.3 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 -0.1 0
D -0.1 0.1 -0.1 0.2 0.7 -0.2 -0.2 -0.2 0.4 0.2 0.2 0.9 -0.1 -0.3 -0.1 0.5 -0.3 -0.1 -0.6 -0.1
E -0.2 0.5 0.8 0.7 0.3 0.1 0.3 -0.3 -1 -0.6 0 0.1 -0.2 -0.2 0.2 0.3 0 -0.2 -0.3 0.4
K 0.2 -0.1 0 0 -0.3 0.2 -0.1 -0.1 -0.3 0.2 0.2 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 0.4 0
R 0.5 -0.1 0 -0.3 -0.3 -0.1 -0.1 -0.1 0.6 0 0.2 -0.1 -0.1 0.2 0.5 0.1 -0.2 -0.1 -0.2 0
H -0.1 0 -0.1 0.2 -0.1 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 -0.1 0
N -0.3 -0.1 0.6 0.2 -0.3 -0.1 -0.1 -0.1 -0.2 0.1 -0.1 -0.1 -0.1 0.2 0.1 0.3 -0.1 -0.1 0 0
Q -0.1 -0.1 0.2 -0.1 0.2 -0.1 -0.1 0.4 -0.2 0 -0.1 -0.1 0 -0.1 -0.2 -0.2 -0.1 0 0.2 0
S 0 0.1 -0.3 0.5 -0.4 0.2 0 -0.1 0.1 0.2 0.2 -0.1 -0.1 0.1 -0.4 -0.1 0.8 -0.1 0.2 -0.1
T 0.3 0.3 0 -0.4 0.1 -0.1 -0.1 -0.1 -0.3 0.1 -0.1 -0.1 0.4 0.2 -0.2 0.2 -0.1 -0.1 0 0
G 0.5 -0.2 0.1 -0.1 0.4 -0.2 -0.1 -0.1 -0.1 0.2 -0.2 -0.1 0.6 -0.2 0 -0.4 -0.2 0.3 0.4 -0.1
P 0.2 0.2 -0.3 -0.3 -0.1 0.3 -0.1 0.3 0.7 -0.1 -0.2 -0.1 -0.1 0.4 -0.2 0 0.4 -0.1 -0.6 -0.1
C 0 -0.1 0.3 -0.2 0.3 -0.1 -0.1 0 -0.2 0.5 0 0 0 -0.1 -0.1 -0.1 -0.1 0 -0.1 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0179 0.3 -0.8 -0.2 0.2 0 -0.6 -0.9 -0.6 1 0.7 0 0.3 -0.8 0.1 0.1 0.8 0.1 0.4 0.4 -0.3
0182 0.5 -0.1 0.3 0.5 0 -0.3 -0.3 -0.4 0.8 1.3 -0.1 -0.4 -0.5 -0.2 -0.1 0.3 -0.4 -0.3 0.2 -0.7
Select residue pair below:
i_j Score Prob
0179_0182 0.905 0.35
0178_0182 0.823 0.27
0177_0182 0.818 0.27
0182_0202 0.790 0.25
Local Interactions:
i_j Score Prob
0182_0183 0.979 0.42
0182_0184 0.869 0.31
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A A M A ...
Page generated in 0.0148 seconds.