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PRMT5 1-300 Return to Main Page
Instructions
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Coupling matrix for [A:0171] and [P:0172]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 -0.1 -0.1 -0.1 0.3 0.4 -0.1 0.2 -0.3 0.1 0.2 0.5 -0.1 -0.2 -0.3 -0.2 0.7 -0.2 0.3 -0.1
F 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
I -0.1 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 -0.1 0 -0.1 0 0.2 0.1 0
L 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0.3 0
V -0.1 0 -0.1 -0.1 -0.1 0 0 -0.1 0.2 -0.2 -0.1 -0.1 0 -0.1 0.2 0.1 -0.1 -0.1 0.7 0
M 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
Y 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 -0.1 0 0 0.2 0
D 0.6 0 -0.1 -0.1 -0.1 -0.1 0 -0.1 0.7 0.5 -0.1 -0.1 0 0.3 0 -0.2 -0.1 -0.1 -0.2 0
E 0.4 0 -0.1 0.2 -0.1 -0.1 0 -0.1 0 0.4 -0.1 -0.1 -0.1 0.1 0.3 -0.3 -0.1 -0.1 0.5 0
K 0.1 0 -0.1 0 0 -0.1 0 0 -0.1 0.1 0 -0.1 0 0.3 -0.1 0.2 -0.1 0 0.1 0
R -0.1 0 0 0 0 0.4 0 0 -0.1 -0.1 0 0 0 0 -0.1 0.1 -0.1 0 0.1 0
H -0.1 0 0 0 0 0 0 0 -0.1 -0.1 0 0.4 0 0.3 -0.1 -0.1 0 0 -0.2 0
N 0.1 0 0 0.4 0 -0.1 0 0 0.1 -0.2 0.3 -0.1 0 -0.1 -0.1 -0.1 -0.1 0 -0.1 0
Q -0.1 0 -0.1 -0.1 0 0 0 0 -0.1 -0.2 -0.1 0.3 0 -0.1 -0.1 0.5 0.3 -0.1 0 0
S -0.2 0 0.3 -0.1 -0.1 -0.1 0 -0.1 0.2 0.5 -0.1 -0.2 -0.1 -0.1 0.3 0.5 -0.1 -0.1 0.1 0
T 0.3 0 -0.1 0.1 -0.1 -0.1 0 -0.1 0.1 0 -0.1 -0.1 0 -0.1 0.2 0.1 -0.1 -0.1 0.3 0
G -0.2 0 -0.1 0 -0.1 0 0 0 -0.1 0.4 0.3 -0.1 0.3 -0.1 -0.1 0.1 -0.1 0.3 -0.2 0
P 0 0 0 0 0 0 0 0 -0.1 0.2 0 0 0 -0.1 0.3 0.2 -0.1 0 -0.1 0
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0171 0.9 -0.7 -0.4 -0.4 0.2 -0.7 -0.7 -0.5 0.5 0.5 0 -0.1 -0.3 -0.1 0.1 0.6 0.3 0.2 -0.1 -0.7
0172 0.2 -0.6 -0.2 -0.1 -0.3 -0.2 -0.6 -0.3 0.3 0.9 -0.1 0 -0.4 0 0.3 0.3 0 -0.2 1.3 -0.6
Select residue pair below:
i_j Score Prob
0171_0175 0.969 0.41
0171_0174 0.874 0.32
0167_0171 0.842 0.29
0171_0176 0.795 0.25
Local Interactions:
i_j Score Prob
0171_0173 1.428 0.82
0171_0172 1.384 0.79
0170_0171 0.922 0.36
0169_0171 0.906 0.35
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A A M A ...
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