May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
PRMT5 1-300 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [N:0170] and [A:0171]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 0 -0.1 -0.1 -0.1 0 0 0.4 0.2 0 -0.1 -0.1 0.3 -0.1 -0.2 0 -0.2 0.2 -0.1 0
F -0.1 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 -0.1 0 0 0 0
I 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L 0.7 -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 0.2 -0.2 0.4 -0.1 0.2 -0.1 0.1 0 0.1 -0.2 -0.1
V -0.1 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 -0.1 -0.1 0 0 0
M -0.1 0 0 0 0 0 0 0 0.3 -0.1 0 0 0 0 0 -0.1 0 0 0 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0.3 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 -0.1 -0.1 0 -0.1 0
D -0.1 0 0.1 -0.1 0.7 0 0 -0.1 0.6 -0.2 0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.3 -0.1 -0.1 0
E -0.3 0 0 0.2 -0.2 0 0 -0.1 0 0 0.3 -0.1 -0.1 -0.1 0.3 0.1 0.4 0.2 -0.2 0
K -0.1 0 0 0 -0.1 0 0 0 0.5 0 -0.1 0.1 0 0.2 -0.1 -0.3 0.2 -0.1 -0.1 0
R -0.2 0 0 0.3 -0.1 0 0 0 -0.2 -0.1 0.3 -0.1 0 -0.1 0.2 0.2 -0.1 -0.1 0.3 0
H -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0.4 0 0.2 -0.1 0.1 0 0 -0.1 0.2 0.9 -0.1 -0.1 -0.1 -0.2 -0.2 -0.1 0 0.1 -0.2 0
Q 0.5 0 -0.1 -0.1 0.2 0 0 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 0.2 0.2 -0.3 0.1 -0.1 0.6 0
S 0.2 0 -0.1 -0.1 0 0 0 -0.1 0 -0.2 0.1 0.2 -0.1 0.1 -0.2 0.3 0 -0.2 -0.2 0
T -0.2 0 0 0 -0.1 0 0 0 -0.1 0.2 -0.1 -0.1 0 0.2 -0.1 0 0.3 -0.1 0.4 0
G 0 0 -0.1 -0.1 -0.1 0 0 0 -0.2 0.2 -0.1 -0.1 -0.1 -0.1 0.2 -0.2 0.4 0.7 -0.1 0
P -0.2 0 0 0 0.3 0 0 0 -0.2 -0.1 0.3 0 0 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 0
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0170 0.4 -0.5 -0.7 0.2 -0.4 -0.5 -0.7 -0.4 0.4 0.3 0.3 0.2 -0.6 0.6 0.7 0.7 0.1 0.5 -0.2 -0.7
0171 0.9 -0.7 -0.4 -0.4 0.2 -0.7 -0.7 -0.5 0.5 0.5 0 -0.1 -0.3 -0.1 0.1 0.6 0.3 0.2 -0.1 -0.7
Select residue pair below:
i_j Score Prob
0171_0175 0.969 0.41
0171_0174 0.874 0.32
0167_0171 0.842 0.29
0171_0176 0.795 0.25
Local Interactions:
i_j Score Prob
0171_0173 1.428 0.82
0171_0172 1.384 0.79
0170_0171 0.922 0.36
0169_0171 0.906 0.35
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A A M A ...
Page generated in 0.0119 seconds.