May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
PRMT5 1-300 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0020] and [N:0021]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 0 0 -0.1 0 0 0 0 0.3 -0.3 -0.1 0 -0.1 -0.1 0.4 0.4 -0.1 -0.1 -0.1 0
F 0.2 0.8 -0.2 0.2 0.1 -0.1 -0.1 -0.2 -0.1 -0.6 -0.2 -0.1 0.4 -0.2 -0.3 0.1 0.3 -0.4 0.2 0.9
I -0.3 -0.1 -0.2 0.3 -0.1 0 0 -0.1 0.4 0.4 0.5 0.3 -0.3 0.4 0.2 -0.2 0.2 -0.2 0 -0.2
L 0.3 -0.3 0.1 -0.3 0.5 -0.1 -0.1 -0.1 0.4 0.1 0.5 -0.2 1 -0.1 -0.1 0 -0.3 0.5 -0.6 0.2
V 0.6 -0.1 0.3 0.3 -0.1 0 0 -0.1 0 -0.5 -0.1 0.3 -0.3 -0.3 -0.1 -0.1 0.3 0.5 0.1 -0.1
M -0.1 0 0 0 0 0 0 0.5 -0.2 -0.1 0 0 -0.1 0 0 -0.1 -0.1 -0.1 0.7 -0.1
W 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0
Y 0.5 -0.1 0.5 -0.1 -0.1 0 0 0 0 -0.3 -0.1 -0.1 0.2 0.6 -0.1 -0.3 -0.1 -0.1 0.1 -0.2
D 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0
E -0.1 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 -0.1 0 -0.1 0.2 0 0.4 0
K 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 -0.1 0 -0.1 0 0 0.5 0
R 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0
H 0 0 0 0 0 0 0 0 -0.1 0.4 0 0 0 -0.1 0 -0.1 0 0 -0.1 0
N 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0
Q -0.1 0 -0.1 -0.1 -0.1 0 0 0 0.2 1.2 -0.1 0 -0.1 -0.2 0.4 -0.3 -0.1 -0.1 -0.2 -0.1
S 0 0 0 0 0 0 0 0 -0.1 -0.2 0 0 -0.1 -0.1 0 -0.1 0 0.5 -0.1 0
T -0.4 -0.1 -0.1 0.1 -0.1 -0.1 -0.1 -0.1 0.2 1 -0.2 -0.1 -0.3 0.8 -0.1 0.6 0.2 -0.3 0.1 -0.2
G -0.1 0 0 0 0 0 0 0 -0.1 0.1 0 0 -0.1 -0.1 0 0.4 0 0 -0.1 0
P -0.1 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 -0.1 0 -0.1 0 0.5 -0.1 0
C -0.1 0 0 0 0 0 0 0 0.3 -0.2 0 0 0.3 -0.1 0 0.3 0 -0.1 -0.1 -0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0020 -0.2 1.1 1 1.3 0.6 -0.1 -0.7 0.4 -0.7 -0.3 -0.5 -0.7 -0.4 -0.7 0.2 -0.4 0.8 -0.4 -0.4 -0.2
0021 0.2 -0.3 -0.2 -0.1 -0.4 -0.7 -0.7 -0.5 1 0.6 -0.1 -0.2 0.2 0.6 -0.1 0.4 0.3 0.2 0.3 -0.1
Select residue pair below:
i_j Score Prob
0020_0041 0.875 0.32
0020_0105 0.806 0.26
Local Interactions:
i_j Score Prob
0019_0020 1.086 0.53
0020_0021 0.930 0.37
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A A M A ...
Page generated in 0.0147 seconds.