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OPENSEQ.org
Janice Reimer Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0012 0 0.2 0.7 0.7 0.7 0.5 -0.3 0.3 -0.2 -0.2 -2 -0.2 -0.1 -0.2 -0.1 0.6 0.2 0.1 -0.3 -0.3
Select residue pair below:
i_j Score Prob
0012_0063 1.699 1.00
0012_0062 1.427 1.00
0012_0066 1.289 0.99
0012_0118 1.190 0.98
0012_0037 1.138 0.97
0012_0042 0.996 0.92
0012_0048 0.874 0.84
0012_0117 0.840 0.80
0012_0023 0.813 0.77
0012_0022 0.786 0.74
0012_0099 0.765 0.71
0012_0060 0.753 0.69
0012_0087 0.747 0.68
0012_0019 0.743 0.67
0012_0061 0.717 0.63
0012_0044 0.684 0.58
0012_0085 0.669 0.55
0012_0065 0.669 0.55
0012_0089 0.665 0.55
0012_0109 0.660 0.54
0012_0069 0.657 0.53
0012_0071 0.629 0.49
0012_0027 0.628 0.48
0012_0086 0.618 0.47
0012_0119 0.602 0.44
0012_0067 0.602 0.44
Local Interactions:
i_j Score Prob
0012_0013 1.259 0.99
0011_0012 0.962 0.90
0012_0014 0.877 0.84
0010_0012 0.721 0.64
See all coupling residues
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Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: C W I R P ...
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