| UniProt: | P75853 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13707 | ||
| Length: | 319 (286) | ||
| Sequences: | 4850 | ||
| Seq/Len: | 16.96 |
| SSUA
Paralog alert: 0.60 [within 20: 0.11] - ratio of genomes with paralogs Cluster includes: SSUA TAUA |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 52_R | 231_A | 3.973 | 1.00 | |
| 243_Q | 246_Q | 3.958 | 1.00 | |
| 51_K | 235_E | 3.947 | 1.00 | |
| 131_K | 159_Q | 3.685 | 1.00 | |
| 239_L | 243_Q | 3.631 | 1.00 | |
| 99_V | 216_R | 3.445 | 1.00 | |
| 303_D | 306_Q | 3.316 | 1.00 | |
| 217_P | 221_K | 3.304 | 1.00 | |
| 128_K | 157_D | 3.277 | 1.00 | |
| 249_A | 259_A | 3.213 | 1.00 | |
| 52_R | 235_E | 3.204 | 1.00 | |
| 227_Q | 231_A | 3.13 | 1.00 | |
| 97_D | 216_R | 3.086 | 1.00 | |
| 123_T | 126_D | 2.868 | 1.00 | |
| 286_Q | 290_D | 2.859 | 1.00 | |
| 32_G | 78_I | 2.795 | 1.00 | |
| 133_A | 177_V | 2.754 | 1.00 | |
| 218_Y | 222_N | 2.739 | 1.00 | |
| 245_E | 263_A | 2.731 | 1.00 | |
| 216_R | 220_E | 2.725 | 1.00 | |
| 28_A | 57_K | 2.662 | 1.00 | |
| 49_L | 233_F | 2.637 | 1.00 | |
| 28_A | 59_S | 2.594 | 1.00 | |
| 122_K | 126_D | 2.499 | 1.00 | |
| 30_R | 59_S | 2.473 | 1.00 | |
| 46_H | 246_Q | 2.43 | 1.00 | |
| 48_L | 235_E | 2.396 | 1.00 | |
| 154_K | 157_D | 2.334 | 1.00 | |
| 153_L | 157_D | 2.167 | 1.00 | |
| 224_A | 228_G | 2.164 | 1.00 | |
| 238_A | 242_S | 2.144 | 1.00 | |
| 290_D | 294_E | 2.136 | 1.00 | |
| 293_Y | 301_K | 2.115 | 1.00 | |
| 45_S | 253_K | 2.031 | 1.00 | |
| 214_A | 219_A | 1.983 | 1.00 | |
| 48_L | 232_T | 1.953 | 1.00 | |
| 80_L | 214_A | 1.907 | 1.00 | |
| 122_K | 197_R | 1.87 | 1.00 | |
| 222_N | 225_F | 1.86 | 1.00 | |
| 184_D | 188_S | 1.857 | 1.00 | |
| 249_A | 253_K | 1.824 | 1.00 | |
| 130_H | 178_D | 1.756 | 1.00 | |
| 246_Q | 249_A | 1.734 | 1.00 | |
| 127_L | 179_A | 1.72 | 1.00 | |
| 214_A | 226_I | 1.717 | 1.00 | |
| 80_L | 226_I | 1.714 | 1.00 | |
| 239_L | 246_Q | 1.713 | 1.00 | |
| 290_D | 301_K | 1.707 | 1.00 | |
| 149_R | 294_E | 1.704 | 1.00 | |
| 258_P | 261_V | 1.685 | 1.00 | |
| 248_I | 263_A | 1.682 | 1.00 | |
| 125_A | 128_K | 1.652 | 1.00 | |
| 125_A | 151_A | 1.649 | 1.00 | |
| 259_A | 263_A | 1.647 | 1.00 | |
| 163_L | 171_A | 1.633 | 1.00 | |
| 141_H | 145_L | 1.589 | 1.00 | |
| 48_L | 239_L | 1.589 | 1.00 | |
| 48_L | 51_K | 1.571 | 1.00 | |
| 131_K | 161_T | 1.561 | 1.00 | |
| 252_A | 259_A | 1.552 | 1.00 | |
| 132_V | 179_A | 1.548 | 1.00 | |
| 228_G | 232_T | 1.515 | 1.00 | |
| 218_Y | 225_F | 1.505 | 1.00 | |
| 102_G | 230_L | 1.503 | 1.00 | |
| 240_T | 247_S | 1.488 | 1.00 | |
| 148_L | 158_I | 1.486 | 1.00 | |
| 263_A | 267_D | 1.485 | 1.00 | |
| 223_G | 227_Q | 1.462 | 1.00 | |
| 80_L | 229_V | 1.456 | 1.00 | |
| 219_A | 226_I | 1.433 | 1.00 | |
| 46_H | 239_L | 1.432 | 1.00 | |
| 92_Q | 216_R | 1.424 | 1.00 | |
| 44_K | 50_E | 1.421 | 1.00 | |
| 218_Y | 226_I | 1.407 | 0.99 | |
| 52_R | 228_G | 1.389 | 0.99 | |
| 124_V | 151_A | 1.368 | 0.99 | |
| 192_L | 264_S | 1.332 | 0.99 | |
| 120_P | 197_R | 1.324 | 0.99 | |
| 47_Q | 50_E | 1.313 | 0.99 | |
| 52_R | 232_T | 1.305 | 0.99 | |
| 215_A | 218_Y | 1.297 | 0.99 | |
| 260_P | 263_A | 1.287 | 0.99 | |
| 76_G | 217_P | 1.282 | 0.99 | |
| 117_E | 195_G | 1.27 | 0.99 | |
| 124_V | 147_A | 1.265 | 0.99 | |
| 148_L | 153_L | 1.26 | 0.99 | |
| 101_V | 230_L | 1.257 | 0.99 | |
| 234_S | 238_A | 1.24 | 0.98 | |
| 283_A | 287_Q | 1.228 | 0.98 | |
| 117_E | 197_R | 1.219 | 0.98 | |
| 63_F | 72_A | 1.21 | 0.98 | |
| 291_L | 295_N | 1.2 | 0.98 | |
| 43_A | 236_A | 1.2 | 0.98 | |
| 144_L | 160_P | 1.198 | 0.98 | |
| 131_K | 178_D | 1.193 | 0.98 | |
| 99_V | 219_A | 1.19 | 0.98 | |
| 116_A | 175_G | 1.189 | 0.98 | |
| 45_S | 254_T | 1.189 | 0.98 | |
| 113_I | 127_L | 1.186 | 0.98 | |
| 74_N | 96_A | 1.184 | 0.98 | |
| 218_Y | 223_G | 1.174 | 0.98 | |
| 115_V | 197_R | 1.172 | 0.98 | |
| 32_G | 63_F | 1.16 | 0.97 | |
| 66_G | 87_P | 1.156 | 0.97 | |
| 112_V | 187_Y | 1.153 | 0.97 | |
| 100_Y | 211_F | 1.147 | 0.97 | |
| 201_D | 204_D | 1.139 | 0.97 | |
| 101_V | 214_A | 1.135 | 0.97 | |
| 146_R | 149_R | 1.133 | 0.97 | |
| 101_V | 226_I | 1.132 | 0.97 | |
| 164_T | 167_D | 1.13 | 0.97 | |
| 264_S | 267_D | 1.13 | 0.97 | |
| 191_L | 264_S | 1.127 | 0.97 | |
| 30_R | 61_V | 1.126 | 0.97 | |
| 80_L | 101_V | 1.122 | 0.97 | |
| 48_L | 52_R | 1.118 | 0.96 | |
| 245_E | 249_A | 1.109 | 0.96 | |
| 68_Q | 71_E | 1.108 | 0.96 | |
| 42_L | 239_L | 1.102 | 0.96 | |
| 43_A | 49_L | 1.099 | 0.96 | |
| 223_G | 226_I | 1.098 | 0.96 | |
| 282_A | 305_R | 1.076 | 0.95 | |
| 31_I | 229_V | 1.074 | 0.95 | |
| 132_V | 158_I | 1.074 | 0.95 | |
| 42_L | 46_H | 1.07 | 0.95 | |
| 69_M | 81_G | 1.067 | 0.95 | |
| 224_A | 227_Q | 1.061 | 0.95 | |
| 73_L | 78_I | 1.06 | 0.95 | |
| 73_L | 81_G | 1.057 | 0.95 | |
| 116_A | 119_S | 1.053 | 0.95 | |
| 56_S | 225_F | 1.05 | 0.94 | |
| 56_S | 228_G | 1.047 | 0.94 | |
| 42_L | 250_L | 1.045 | 0.94 | |
| 116_A | 172_F | 1.04 | 0.94 | |
| 248_I | 259_A | 1.037 | 0.94 | |
| 216_R | 219_A | 1.036 | 0.94 | |
| 83_T | 213_L | 1.034 | 0.94 | |
| 192_L | 260_P | 1.029 | 0.94 | |
| 289_A | 302_V | 1.027 | 0.94 | |
| 171_A | 177_V | 1.013 | 0.93 | |
| 128_K | 153_L | 1.012 | 0.93 | |
| 30_R | 79_D | 1.006 | 0.93 | |
| 115_V | 119_S | 1.003 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2x26A | 2 | 0.9248 | 100 | 0.334 | Contact Map | 0.758 |
| 3qslA | 2 | 0.9843 | 100 | 0.364 | Contact Map | 0.717 |
| 2g29A | 1 | 0.9592 | 100 | 0.383 | Contact Map | 0.735 |
| 3un6A | 1 | 0.9655 | 100 | 0.387 | Contact Map | 0.558 |
| 3ix1A | 2 | 0.8903 | 100 | 0.39 | Contact Map | 0.74 |
| 2de3A | 2 | 0.9248 | 100 | 0.395 | Contact Map | 0.636 |
| 4eswA | 2 | 0.9154 | 100 | 0.404 | Contact Map | 0.709 |
| 2i49A | 1 | 0.9373 | 100 | 0.418 | Contact Map | 0.665 |
| 2x7qA | 1 | 0.9248 | 100 | 0.424 | Contact Map | 0.692 |
| 3ksxA | 1 | 0.9875 | 100 | 0.447 | Contact Map | 0.73 |
Sequence Conservation (Image Generated using WebLogo v3)