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OPENSEQ.org

FADM - YBAO
UniProt: P77712 - P0ACJ5
Length: 284
Sequences: 200
Seq/Len: 0.71
I_Prob: 0.00

FADM - Long-chain acyl-CoA thioesterase FadM
Paralog alert: 0.65 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: FADM YBGC
YBAO - Uncharacterized HTH-type transcriptional regulator YbaO
Paralog alert: 0.82 [within 20: 0.14] - ratio of genomes with paralogs
Cluster includes: ASNC LRP YBAO
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
119_L 56_D 1.24 0.00
97_Q 47_I 1.18 0.00
68_D 91_P 1.14 0.00
18_V 20_S 1.12 0.00
60_Y 94_L 1.07 0.00
90_I 41_R 1.07 0.00
12_L 76_S 1.03 0.00
78_Q 48_L 1.02 0.00
70_L 131_L 1.02 0.00
72_I 142_Q 1.01 0.00
119_L 2_L 1.01 0.00
72_I 117_Y 0.99 0.00
108_C 66_A 0.96 0.00
63_P 20_S 0.95 0.00
60_Y 33_T 0.95 0.00
111_L 9_L 0.92 0.00
79_L 5_I 0.91 0.00
49_I 66_A 0.91 0.00
110_D 109_V 0.90 0.00
105_T 31_T 0.88 0.00
124_R 88_T 0.87 0.00
63_P 113_D 0.86 0.00
96_G 45_D 0.85 0.00
129_Q 70_I 0.85 0.00
90_I 107_M 0.84 0.00
118_A 18_T 0.83 0.00
119_L 28_V 0.83 0.00
27_L 78_E 0.83 0.00
34_G 142_Q 0.82 0.00
83_S 93_V 0.82 0.00
55_N 40_K 0.81 0.00
109_I 47_I 0.80 0.00
25_E 40_K 0.80 0.00
54_V 40_K 0.80 0.00
66_L 119_E 0.80 0.00
27_L 138_F 0.80 0.00
117_L 70_I 0.79 0.00
68_D 93_V 0.79 0.00
111_L 42_L 0.79 0.00
58_I 151_I 0.78 0.00
21_A 21_L 0.78 0.00
107_V 17_C 0.78 0.00
63_P 52_V 0.78 0.00
125_E 68_V 0.78 0.00
112_K 5_I 0.78 0.00
62_R 67_F 0.77 0.00
69_L 128_V 0.77 0.00
72_I 114_M 0.77 0.00
67_S 109_V 0.77 0.00
53_V 106_L 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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