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OPENSEQ.org

YNJB - YNJC
UniProt: P76223 - P76224
Length: 899
Sequences: 620
Seq/Len: 0.74
I_Prob: 0.00

YNJB - Protein YnjB
Paralog alert: 0.69 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: CYSP MALE MODA POTD POTF SUBI THIB UGPB YCJN YDCS YNJB
YNJC - Inner membrane ABC transporter permease protein YnjC
Paralog alert: 0.53 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: THIP YNJC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
372_G 381_W 1.45 0.00
143_G 424_V 1.42 0.00
167_Q 323_L 1.34 0.00
309_A 45_F 1.34 0.00
64_N 48_P 1.27 0.00
368_E 424_V 1.25 0.00
228_W 318_S 1.22 0.00
379_Q 87_R 1.18 0.00
59_T 69_L 1.16 0.00
59_T 247_L 1.15 0.00
97_L 181_L 1.15 0.00
302_T 477_I 1.14 0.00
260_T 113_D 1.12 0.00
308_N 424_V 1.11 0.00
302_T 414_G 1.10 0.00
322_S 317_N 1.10 0.00
125_R 66_V 1.08 0.00
326_Q 389_P 1.08 0.00
322_S 292_L 1.08 0.00
71_A 355_P 1.08 0.00
65_L 276_P 1.08 0.00
233_V 296_L 1.07 0.00
80_I 70_L 1.06 0.00
127_V 167_L 1.06 0.00
59_T 320_T 1.06 0.00
364_P 295_V 1.05 0.00
201_L 468_A 1.04 0.00
201_L 379_V 1.04 0.00
318_N 173_S 1.04 0.00
170_Q 57_T 1.04 0.00
127_V 174_R 1.03 0.00
79_R 209_I 1.03 0.00
80_I 301_L 1.03 0.00
65_L 306_D 1.03 0.00
96_L 66_V 1.03 0.00
62_A 46_A 1.03 0.00
158_R 238_G 1.02 0.00
111_N 332_L 1.02 0.00
229_Q 294_G 1.02 0.00
82_T 220_A 1.02 0.00
79_R 332_L 1.02 0.00
127_V 96_L 1.01 0.00
379_Q 43_A 1.01 0.00
383_H 173_S 1.01 0.00
307_A 335_L 1.01 0.00
164_Q 331_L 1.01 0.00
141_T 331_L 1.01 0.00
236_P 45_F 1.01 0.00
178_A 121_F 1.00 0.00
229_Q 110_L 1.00 0.00
155_F 444_G 0.99 0.00
60_H 54_L 0.99 0.00
262_R 486_L 0.99 0.00
326_Q 209_I 0.99 0.00
62_A 334_L 0.99 0.00
210_A 14_W 0.99 0.00
55_G 251_A 0.98 0.00
276_I 332_L 0.98 0.00
383_H 487_L 0.98 0.00
311_A 174_R 0.98 0.00
66_K 487_L 0.98 0.00
293_G 132_G 0.97 0.00
178_A 239_A 0.97 0.00
383_H 62_T 0.97 0.00
163_P 337_L 0.97 0.00
380_E 251_A 0.97 0.00
298_V 444_G 0.96 0.00
324_D 283_G 0.96 0.00
283_A 117_L 0.96 0.00
385_Y 380_V 0.96 0.00
273_Q 482_A 0.95 0.00
311_A 320_T 0.95 0.00
188_P 99_P 0.95 0.00
158_R 356_A 0.95 0.00
229_Q 331_L 0.95 0.00
347_P 332_L 0.95 0.00
351_R 411_Q 0.95 0.00
96_L 416_S 0.95 0.00
306_N 424_V 0.95 0.00
227_L 129_D 0.95 0.00
342_D 70_L 0.95 0.00
307_A 331_L 0.95 0.00
201_L 424_V 0.94 0.00
252_M 219_L 0.94 0.00
97_L 201_S 0.94 0.00
368_E 173_S 0.94 0.00
76_A 57_T 0.94 0.00
375_N 498_L 0.94 0.00
368_E 120_Y 0.94 0.00
379_Q 247_L 0.94 0.00
229_Q 261_R 0.94 0.00
167_Q 315_L 0.93 0.00
64_N 418_A 0.93 0.00
282_P 219_L 0.93 0.00
327_L 414_G 0.93 0.00
379_Q 319_L 0.93 0.00
177_K 329_A 0.93 0.00
324_D 327_F 0.93 0.00
111_N 299_V 0.93 0.00
348_D 44_L 0.93 0.00
171_A 210_I 0.93 0.00
69_R 325_A 0.93 0.00
197_L 381_W 0.92 0.00
59_T 494_A 0.92 0.00
53_V 173_S 0.92 0.00
76_A 190_L 0.92 0.00
251_R 229_Q 0.92 0.00
236_P 43_A 0.92 0.00
314_K 244_L 0.92 0.00
143_G 421_F 0.92 0.00
246_P 178_L 0.92 0.00
60_H 175_W 0.92 0.00
69_R 151_L 0.91 0.00
246_P 147_L 0.91 0.00
236_P 52_Q 0.91 0.00
378_E 315_L 0.91 0.00
120_T 424_V 0.91 0.00
199_Q 352_I 0.91 0.00
314_K 316_I 0.91 0.00
311_A 394_I 0.91 0.00
371_A 426_C 0.91 0.00
319_F 221_V 0.90 0.00
342_D 124_F 0.90 0.00
323_P 86_Q 0.90 0.00
163_P 247_L 0.90 0.00
379_Q 174_R 0.90 0.00
347_P 74_L 0.90 0.00
52_W 302_A 0.90 0.00
167_Q 286_L 0.90 0.00
355_Q 190_L 0.90 0.00
228_W 413_L 0.90 0.00
360_Q 282_P 0.90 0.00
283_A 326_T 0.90 0.00
302_T 379_V 0.89 0.00
234_L 354_L 0.89 0.00
257_K 36_L 0.89 0.00
307_A 483_L 0.89 0.00
181_G 359_L 0.89 0.00
332_P 57_T 0.89 0.00
279_G 307_Q 0.89 0.00
127_V 467_V 0.89 0.00
126_Y 301_L 0.89 0.00
333_A 325_A 0.89 0.00
278_S 150_I 0.89 0.00
163_P 301_L 0.88 0.00
106_T 329_A 0.88 0.00
62_A 490_L 0.88 0.00
121_L 240_L 0.88 0.00
226_P 183_L 0.88 0.00
315_V 416_S 0.88 0.00
72_D 461_T 0.88 0.00
287_S 45_F 0.88 0.00
39_A 218_T 0.88 0.00
367_A 72_A 0.88 0.00
256_L 245_L 0.88 0.00
125_R 250_A 0.88 0.00
49_Y 196_A 0.88 0.00
260_T 105_T 0.88 0.00
48_R 140_A 0.87 0.00
225_A 345_Q 0.87 0.00
174_E 88_M 0.87 0.00
255_L 237_K 0.87 0.00
163_P 129_D 0.87 0.00
373_W 425_K 0.86 0.00
362_L 232_I 0.86 0.00
36_W 325_A 0.86 0.00
217_D 72_A 0.86 0.00
68_V 129_D 0.86 0.00
227_L 351_P 0.86 0.00
369_P 458_R 0.86 0.00
126_Y 319_L 0.86 0.00
187_R 412_T 0.86 0.00
55_G 120_Y 0.86 0.00
289_G 40_H 0.86 0.00
307_A 388_M 0.86 0.00
322_S 39_T 0.85 0.00
65_L 83_P 0.85 0.00
286_Y 247_L 0.85 0.00
194_T 442_A 0.85 0.00
322_S 55_L 0.85 0.00
64_N 291_P 0.85 0.00
291_R 418_A 0.85 0.00
347_P 72_A 0.85 0.00
337_D 442_A 0.85 0.00
125_R 422_F 0.85 0.00
53_V 197_I 0.85 0.00
182_T 490_L 0.85 0.00
236_P 376_W 0.85 0.00
371_A 355_P 0.85 0.00
317_A 404_S 0.85 0.00
233_V 254_L 0.84 0.00
95_D 413_L 0.84 0.00
340_V 221_V 0.84 0.00
234_L 61_T 0.84 0.00
271_H 143_E 0.84 0.00
372_G 416_S 0.84 0.00
163_P 66_V 0.84 0.00
286_Y 244_L 0.84 0.00
71_A 324_V 0.84 0.00
160_D 328_I 0.84 0.00
322_S 62_T 0.84 0.00
182_T 173_S 0.84 0.00
329_K 350_L 0.84 0.00
60_H 384_L 0.84 0.00
346_L 332_L 0.84 0.00
321_L 325_A 0.84 0.00
283_A 487_L 0.84 0.00
368_E 87_R 0.84 0.00
334_V 331_L 0.84 0.00
111_N 252_Y 0.84 0.00
201_L 355_P 0.84 0.00
311_A 88_M 0.83 0.00
174_E 57_T 0.83 0.00
348_D 72_A 0.83 0.00
378_E 424_V 0.83 0.00
289_G 379_V 0.83 0.00
76_A 65_A 0.83 0.00
52_W 313_E 0.83 0.00
203_M 195_L 0.83 0.00
167_Q 83_P 0.83 0.00
227_L 322_G 0.83 0.00
113_L 326_T 0.83 0.00
164_Q 302_A 0.83 0.00
228_W 132_G 0.83 0.00
163_P 377_T 0.83 0.00
233_V 68_A 0.83 0.00
238_L 154_V 0.82 0.00
116_G 288_I 0.82 0.00
368_E 119_D 0.82 0.00
148_W 188_P 0.82 0.00
311_A 319_L 0.82 0.00
319_F 69_L 0.82 0.00
226_P 272_G 0.82 0.00
312_A 361_A 0.82 0.00
383_H 331_L 0.82 0.00
79_R 463_T 0.82 0.00
177_K 437_F 0.82 0.00
320_L 157_E 0.82 0.00
59_T 167_L 0.82 0.00
315_V 301_L 0.82 0.00
266_T 138_T 0.82 0.00
157_A 242_S 0.82 0.00
219_T 126_P 0.82 0.00
184_T 192_M 0.81 0.00
197_L 45_F 0.81 0.00
181_G 153_A 0.81 0.00
150_G 178_L 0.81 0.00
77_V 418_A 0.81 0.00
307_A 106_S 0.81 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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