May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

GLRX1 - TRML
UniProt: P68688 - P0AGJ7
Length: 242
Sequences: 137
Seq/Len: 0.60
I_Prob: 0.00

GLRX1 - Glutaredoxin-1
Paralog alert: 0.62 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: GLRX1 GLRX3 NRDH
TRML - tRNA (cytidine(34)-2'-O)-methyltransferase
Paralog alert: 0.90 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: RLMB TRML
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
69_I 116_A 1.44 0.00
33_Y 110_I 1.42 0.00
51_K 66_F 1.35 0.00
69_I 122_I 1.19 0.00
18_K 59_R 1.18 0.00
74_D 25_T 1.17 0.00
38_I 43_R 1.16 0.00
61_Q 143_E 1.13 0.00
3_T 127_D 1.09 0.00
8_R 136_A 1.06 0.00
46_E 120_I 1.06 0.00
18_K 128_S 1.06 0.00
41_E 25_T 1.03 0.00
34_Q 112_D 1.03 0.00
50_Q 116_A 1.03 0.00
65_D 4_I 1.02 0.00
65_D 87_S 1.00 0.00
72_Y 83_T 0.98 0.00
69_I 7_Y 0.98 0.00
44_T 120_I 0.97 0.00
58_T 152_G 0.97 0.00
39_R 8_E 0.97 0.00
63_F 136_A 0.96 0.00
19_D 150_Y 0.96 0.00
66_Q 92_Q 0.96 0.00
69_I 78_L 0.95 0.00
23_K 98_M 0.95 0.00
63_F 153_A 0.94 0.00
52_A 62_D 0.94 0.00
4_V 131_M 0.94 0.00
15_V 149_G 0.93 0.00
54_K 144_A 0.93 0.00
17_A 143_E 0.92 0.00
66_Q 84_P 0.91 0.00
58_T 57_V 0.91 0.00
10_G 142_Y 0.91 0.00
63_F 57_V 0.90 0.00
7_G 55_T 0.88 0.00
41_E 96_Y 0.88 0.00
65_D 126_P 0.88 0.00
80_K 131_M 0.87 0.00
61_Q 146_R 0.87 0.00
74_D 151_P 0.87 0.00
52_A 5_V 0.86 0.00
16_R 92_Q 0.86 0.00
45_K 13_P 0.86 0.00
4_V 97_L 0.86 0.00
44_T 110_I 0.86 0.00
24_L 7_Y 0.86 0.00
33_Y 111_L 0.86 0.00
39_R 43_R 0.85 0.00
15_V 88_A 0.84 0.00
74_D 141_V 0.84 0.00
65_D 70_E 0.84 0.00
3_T 112_D 0.84 0.00
43_I 58_T 0.83 0.00
13_Y 97_L 0.83 0.00
52_A 33_E 0.83 0.00
50_Q 98_M 0.82 0.00
65_D 89_V 0.82 0.00
72_Y 2_L 0.81 0.00
36_V 40_D 0.81 0.00
3_T 3_N 0.81 0.00
22_E 28_R 0.81 0.00
7_G 103_T 0.81 0.00
51_K 8_E 0.81 0.00
16_R 91_Y 0.81 0.00
13_Y 103_T 0.81 0.00
24_L 2_L 0.81 0.00
24_L 44_L 0.80 0.00
61_Q 147_Q 0.80 0.00
7_G 153_A 0.80 0.00
23_K 69_A 0.80 0.00
47_D 154_V 0.80 0.00
35_Y 81_K 0.80 0.00
77_A 45_R 0.79 0.00
48_L 25_T 0.79 0.00
10_G 122_I 0.79 0.00
23_K 149_G 0.79 0.00
74_D 134_S 0.79 0.00
20_L 45_R 0.79 0.00
3_T 38_A 0.79 0.00
37_D 63_Y 0.79 0.00
51_K 96_Y 0.79 0.00
24_L 114_L 0.79 0.00
81_E 88_A 0.79 0.00
63_F 131_M 0.78 0.00
40_A 73_Q 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 2.0262 seconds.