May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

METI - NRDH
UniProt: P31547 - P0AC65
Length: 298
Sequences: 226
Seq/Len: 0.81
I_Prob: 0.00

METI - D-methionine transport system permease protein MetI
Paralog alert: 0.93 [within 20: 0.64] - ratio of genomes with paralogs
Cluster includes: ARTM ARTQ GLNP GLTJ GLTK HISM HISQ METI PHNE SSUC TAUC YECS YEHW
NRDH - Glutaredoxin-like protein NrdH
Paralog alert: 0.47 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: GLRX1 GLRX3 NRDH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
54_R 3_I 1.16 0.00
203_I 3_I 1.15 0.00
209_R 7_T 1.12 0.00
139_L 57_G 1.08 0.00
212_R 31_I 0.97 0.00
195_L 3_I 0.96 0.00
39_Y 7_T 0.93 0.00
23_S 2_R 0.92 0.00
105_A 5_I 0.92 0.00
17_L 20_A 0.90 0.00
158_V 54_V 0.87 0.00
125_A 38_E 0.86 0.00
137_V 5_I 0.84 0.00
11_R 3_I 0.81 0.00
55_T 45_A 0.81 0.00
32_L 13_Q 0.80 0.00
55_T 57_G 0.80 0.00
27_G 37_P 0.79 0.00
33_P 26_F 0.79 0.00
13_V 5_I 0.79 0.00
79_T 33_V 0.78 0.00
52_L 41_E 0.78 0.00
20_T 39_A 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.9507 seconds.