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OPENSEQ.org

BCP - DAPA
UniProt: P0AE52 - P0A6L2
Length: 448
Sequences: 382
Seq/Len: 0.86
I_Prob: 0.00

BCP - Putative peroxiredoxin bcp
Paralog alert: 0.88 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: AHPC BCP DSBE TPX
DAPA - 4-hydroxy-tetrahydrodipicolinate synthase
Paralog alert: 0.62 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: DAPA NANA YAGE YJHH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
70_I 33_A 0.99 0.00
125_L 128_L 0.94 0.00
64_G 273_P 0.93 0.00
8_D 63_T 0.89 0.00
99_V 263_A 0.89 0.00
12_K 33_A 0.86 0.00
92_L 2_F 0.86 0.00
150_N 277_S 0.85 0.00
59_E 262_V 0.85 0.00
31_Q 273_P 0.82 0.00
57_M 53_H 0.82 0.00
20_G 284_A 0.82 0.00
129_D 182_V 0.82 0.00
22_Q 219_K 0.81 0.00
63_A 212_R 0.81 0.00
67_V 273_P 0.80 0.00
131_K 52_N 0.79 0.00
100_C 109_R 0.79 0.00
76_E 51_L 0.79 0.00
104_G 67_A 0.78 0.00
35_V 145_P 0.78 0.00
70_I 58_D 0.78 0.00
99_V 97_I 0.78 0.00
23_V 219_K 0.77 0.00
35_V 197_L 0.77 0.00
79_S 159_G 0.77 0.00
125_L 286_L 0.77 0.00
94_D 238_P 0.76 0.00
15_L 2_F 0.75 0.00
20_G 199_G 0.74 0.00
61_K 171_N 0.73 0.00
125_L 142_D 0.73 0.00
61_K 14_D 0.73 0.00
108_E 192_L 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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