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OPENSEQ.org

ENVR - PANF
UniProt: P0ACT2 - P16256
Length: 703
Sequences: 450
Seq/Len: 0.67
I_Prob: 0.00

ENVR - Probable acrEF/envCD operon repressor
Paralog alert: 0.81 [within 20: 0.20] - ratio of genomes with paralogs
Cluster includes: ACRR BDCR BETI COMR ENVR NEMR RUTR SLMA UIDR YBIH YBJK YJDC
PANF - Sodium/pantothenate symporter
Paralog alert: 0.72 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: ACTP PANF PUTP YIDK
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
32_T 267_K 1.40 0.00
24_F 244_V 1.13 0.00
18_E 356_R 1.11 0.00
52_F 167_I 1.10 0.00
67_P 434_V 1.10 0.00
85_P 19_I 1.09 0.00
58_L 385_A 0.99 0.00
84_D 372_V 0.99 0.00
62_M 356_R 0.97 0.00
42_N 89_L 0.95 0.00
54_N 201_I 0.94 0.00
190_A 419_R 0.94 0.00
89_L 171_L 0.93 0.00
52_F 329_M 0.93 0.00
51_H 190_L 0.92 0.00
17_I 421_N 0.90 0.00
59_F 353_L 0.89 0.00
142_E 392_I 0.88 0.00
13_R 379_A 0.87 0.00
42_N 194_I 0.87 0.00
199_R 465_V 0.86 0.00
141_R 59_A 0.85 0.00
144_L 50_M 0.85 0.00
53_E 201_I 0.85 0.00
50_W 89_L 0.84 0.00
40_A 164_I 0.83 0.00
16_L 326_A 0.82 0.00
16_L 418_E 0.81 0.00
17_I 454_P 0.80 0.00
53_E 421_N 0.80 0.00
51_H 347_I 0.79 0.00
132_K 25_R 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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