| UniProt: | P77170 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13824 | ||
| Length: | 196 (187) | ||
| Sequences: | 4123 | ||
| Seq/Len: | 22.05 |
| PINQ
Paralog alert: 0.63 [within 20: 0.18] - ratio of genomes with paralogs Cluster includes: PINE PINQ PINR |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 52_G | 55_R | 3.89 | 1.00 | |
| 37_I | 59_R | 3.636 | 1.00 | |
| 39_E | 52_G | 2.902 | 1.00 | |
| 56_L | 66_L | 2.893 | 1.00 | |
| 163_R | 176_E | 2.837 | 1.00 | |
| 8_C | 21_R | 2.496 | 1.00 | |
| 124_E | 131_R | 2.444 | 1.00 | |
| 21_R | 25_E | 2.292 | 1.00 | |
| 88_L | 93_I | 2.215 | 1.00 | |
| 112_M | 123_F | 2.16 | 1.00 | |
| 138_R | 142_A | 2.079 | 1.00 | |
| 159_A | 163_R | 2.049 | 1.00 | |
| 97_C | 100_L | 2.028 | 1.00 | |
| 78_A | 115_Q | 2.017 | 1.00 | |
| 171_S | 175_R | 2.008 | 1.00 | |
| 163_R | 168_V | 1.949 | 1.00 | |
| 6_A | 24_I | 1.946 | 1.00 | |
| 122_E | 126_D | 1.896 | 1.00 | |
| 115_Q | 119_A | 1.887 | 1.00 | |
| 111_K | 126_D | 1.866 | 1.00 | |
| 21_R | 36_I | 1.85 | 1.00 | |
| 111_K | 122_E | 1.814 | 1.00 | |
| 12_T | 15_Q | 1.804 | 1.00 | |
| 60_L | 66_L | 1.801 | 1.00 | |
| 79_M | 83_K | 1.783 | 1.00 | |
| 168_V | 176_E | 1.755 | 1.00 | |
| 132_T | 136_I | 1.75 | 1.00 | |
| 5_F | 56_L | 1.747 | 1.00 | |
| 129_L | 133_H | 1.718 | 1.00 | |
| 78_A | 118_S | 1.712 | 1.00 | |
| 21_R | 38_E | 1.705 | 1.00 | |
| 112_M | 119_A | 1.697 | 1.00 | |
| 139_A | 144_K | 1.668 | 1.00 | |
| 53_F | 84_T | 1.627 | 1.00 | |
| 44_S | 125_R | 1.615 | 1.00 | |
| 87_Q | 91_T | 1.613 | 1.00 | |
| 22_R | 26_S | 1.602 | 1.00 | |
| 35_Q | 55_R | 1.589 | 1.00 | |
| 174_A | 184_I | 1.542 | 1.00 | |
| 81_I | 118_S | 1.51 | 1.00 | |
| 60_L | 93_I | 1.51 | 1.00 | |
| 78_A | 82_R | 1.475 | 1.00 | |
| 125_R | 128_L | 1.464 | 1.00 | |
| 89_T | 111_K | 1.46 | 1.00 | |
| 82_R | 115_Q | 1.415 | 1.00 | |
| 181_R | 185_L | 1.403 | 0.99 | |
| 137_V | 141_G | 1.386 | 0.99 | |
| 10_I | 15_Q | 1.383 | 0.99 | |
| 4_I | 29_F | 1.378 | 0.99 | |
| 5_F | 59_R | 1.366 | 0.99 | |
| 79_M | 86_E | 1.344 | 0.99 | |
| 153_N | 156_Q | 1.332 | 0.99 | |
| 72_D | 121_A | 1.309 | 0.99 | |
| 164_I | 173_I | 1.307 | 0.99 | |
| 107_S | 110_G | 1.286 | 0.99 | |
| 135_G | 139_A | 1.276 | 0.99 | |
| 25_E | 36_I | 1.259 | 0.99 | |
| 86_E | 90_E | 1.248 | 0.99 | |
| 171_S | 181_R | 1.232 | 0.98 | |
| 168_V | 172_A | 1.229 | 0.98 | |
| 85_V | 114_M | 1.219 | 0.98 | |
| 169_S | 172_A | 1.209 | 0.98 | |
| 49_E | 54_N | 1.208 | 0.98 | |
| 162_E | 166_S | 1.207 | 0.98 | |
| 68_V | 95_V | 1.203 | 0.98 | |
| 184_I | 187_A | 1.194 | 0.98 | |
| 185_L | 189_A | 1.175 | 0.98 | |
| 6_A | 36_I | 1.161 | 0.97 | |
| 41_I | 51_P | 1.152 | 0.97 | |
| 24_I | 67_I | 1.146 | 0.97 | |
| 8_C | 17_T | 1.144 | 0.97 | |
| 69_T | 134_S | 1.142 | 0.97 | |
| 133_H | 136_I | 1.139 | 0.97 | |
| 68_V | 97_C | 1.131 | 0.97 | |
| 75_G | 81_I | 1.126 | 0.97 | |
| 164_I | 188_K | 1.104 | 0.96 | |
| 136_I | 146_F | 1.097 | 0.96 | |
| 163_R | 166_S | 1.084 | 0.96 | |
| 65_Q | 96_H | 1.08 | 0.95 | |
| 37_I | 56_L | 1.079 | 0.95 | |
| 127_L | 131_R | 1.074 | 0.95 | |
| 53_F | 56_L | 1.072 | 0.95 | |
| 136_I | 140_R | 1.072 | 0.95 | |
| 160_V | 184_I | 1.07 | 0.95 | |
| 163_R | 173_I | 1.068 | 0.95 | |
| 138_R | 141_G | 1.041 | 0.94 | |
| 112_M | 116_V | 1.028 | 0.94 | |
| 112_M | 120_V | 1.027 | 0.94 | |
| 66_L | 88_L | 1.026 | 0.94 | |
| 55_R | 59_R | 1.006 | 0.93 | |
| 160_V | 173_I | 1.006 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1gdtA | 2 | 0.9337 | 100 | 0.143 | Contact Map | 0.657 |
| 3uj3X | 1 | 0.9541 | 100 | 0.161 | Contact Map | 0.418 |
| 2r0qC | 4 | 0.9592 | 100 | 0.182 | Contact Map | 0.662 |
| 4bqqA | 2 | 0.9694 | 100 | 0.278 | Contact Map | 0.671 |
| 3g13A | 2 | 0.7806 | 100 | 0.343 | Contact Map | 0.576 |
| 3guvA | 1 | 0.7653 | 100 | 0.355 | Contact Map | 0.54 |
| 2gm5A | 4 | 0.7092 | 100 | 0.372 | Contact Map | 0.85 |
| 3lhkA | 4 | 0.7347 | 99.9 | 0.46 | Contact Map | 0.64 |
| 3bvpA | 2 | 0.6327 | 99.9 | 0.462 | Contact Map | 0.636 |
| 3ilxA | 2 | 0.6633 | 99.9 | 0.462 | Contact Map | 0.622 |
Sequence Conservation (Image Generated using WebLogo v3)