| UniProt: | P76011 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG14338 | ||
| Length: | 84 (83) | ||
| Sequences: | 1001 | ||
| Seq/Len: | 12.06 |
| YMGE
Paralog alert: 0.50 [within 20: 0.01] - ratio of genomes with paralogs Cluster includes: YEAQ YMGE |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 11_L | 33_C | 2.569 | 1.00 | |
| 6_W | 44_G | 2.47 | 1.00 | |
| 38_V | 74_V | 2.147 | 1.00 | |
| 64_F | 68_V | 2.085 | 1.00 | |
| 34_I | 38_V | 1.906 | 1.00 | |
| 18_K | 27_G | 1.904 | 1.00 | |
| 42_V | 74_V | 1.841 | 1.00 | |
| 35_L | 78_F | 1.77 | 1.00 | |
| 21_M | 76_G | 1.723 | 1.00 | |
| 43_G | 66_V | 1.681 | 1.00 | |
| 33_C | 37_I | 1.631 | 1.00 | |
| 18_K | 32_T | 1.608 | 1.00 | |
| 16_I | 68_V | 1.577 | 1.00 | |
| 25_D | 79_R | 1.435 | 1.00 | |
| 44_G | 67_A | 1.414 | 1.00 | |
| 15_I | 19_L | 1.399 | 0.99 | |
| 65_L | 69_V | 1.395 | 0.99 | |
| 12_I | 16_I | 1.387 | 0.99 | |
| 11_L | 29_F | 1.374 | 0.99 | |
| 13_A | 67_A | 1.348 | 0.99 | |
| 38_V | 41_V | 1.341 | 0.99 | |
| 20_I | 68_V | 1.339 | 0.99 | |
| 29_F | 33_C | 1.316 | 0.99 | |
| 31_L | 34_I | 1.292 | 0.99 | |
| 9_F | 64_F | 1.286 | 0.99 | |
| 76_G | 80_L | 1.274 | 0.99 | |
| 27_G | 31_L | 1.273 | 0.99 | |
| 80_L | 83_R | 1.254 | 0.99 | |
| 15_I | 29_F | 1.216 | 0.98 | |
| 47_A | 66_V | 1.213 | 0.98 | |
| 16_I | 19_L | 1.206 | 0.98 | |
| 22_P | 32_T | 1.203 | 0.98 | |
| 21_M | 72_I | 1.196 | 0.98 | |
| 5_A | 64_F | 1.162 | 0.97 | |
| 18_K | 26_G | 1.135 | 0.97 | |
| 4_I | 8_I | 1.113 | 0.96 | |
| 15_I | 18_K | 1.112 | 0.96 | |
| 18_K | 23_G | 1.091 | 0.96 | |
| 18_K | 22_P | 1.041 | 0.94 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4g1uA | 2 | 0.9286 | 65.7 | 0.803 | Contact Map | 0.155 |
| 2nq2A | 2 | 0.9167 | 65.2 | 0.804 | Contact Map | 0.285 |
| 2qi9A | 2 | 0.9167 | 43.2 | 0.828 | Contact Map | 0.319 |
| 4hzuS | 1 | 0.9643 | 26.8 | 0.846 | Contact Map | 0.183 |
| 4dveA | 3 | 0.9881 | 17.4 | 0.859 | Contact Map | 0.299 |
| 3b9wA | 1 | 0.9762 | 17.2 | 0.859 | Contact Map | 0.135 |
| 3rlbA | 2 | 0.9643 | 15.6 | 0.862 | Contact Map | 0.167 |
| 4huqS | 1 | 0.9881 | 14.2 | 0.864 | Contact Map | 0.127 |
| 3p5nA | 2 | 0.9643 | 10.8 | 0.871 | Contact Map | 0.313 |
| 3hd6A | 1 | 1 | 5.6 | 0.887 | Contact Map | 0.249 |
Sequence Conservation (Image Generated using WebLogo v3)