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OPENSEQ.org

YEAQ - UPF0410 protein YeaQ
UniProt: P64485 Sequence
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG13503
Length: 82 (81)
Sequences: 798
Seq/Len: 9.85

YEAQ
Paralog alert: 0.47 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: YEAQ YMGE
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
38_V 73_V 2.336 1.00
63_F 67_V 2.315 1.00
34_L 38_V 2.224 1.00
6_W 44_G 2.006 1.00
11_L 33_I 1.935 1.00
18_K 27_G 1.927 1.00
18_K 32_T 1.794 1.00
15_I 19_W 1.625 1.00
16_L 67_V 1.62 1.00
13_A 66_A 1.596 1.00
42_V 73_V 1.58 1.00
38_V 41_V 1.528 1.00
35_L 77_Y 1.522 1.00
21_M 75_F 1.513 1.00
25_D 78_R 1.507 1.00
15_I 29_F 1.439 1.00
29_F 33_I 1.434 1.00
40_A 66_A 1.43 1.00
22_P 32_T 1.407 0.99
75_F 79_K 1.352 0.99
12_I 16_L 1.349 0.99
43_G 65_V 1.342 0.99
31_M 34_L 1.332 0.99
47_S 65_V 1.322 0.99
9_F 63_F 1.285 0.99
6_W 62_S 1.275 0.99
15_I 18_K 1.193 0.98
18_K 22_P 1.192 0.98
33_I 37_I 1.144 0.97
23_G 32_T 1.132 0.97
68_I 72_V 1.122 0.96
11_L 29_F 1.11 0.96
18_K 23_G 1.097 0.96
51_G 57_G 1.046 0.94
35_L 73_V 1.035 0.94
18_K 26_G 1.028 0.93
18_K 25_D 1.02 0.93
17_A 73_V 1.012 0.93
16_L 19_W 1.011 0.93
24_K 27_G 1.011 0.93
44_G 62_S 1.005 0.92
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results:
PDB Chains Cov P(%) HHΔ   Acc
4g1uA20.93941.40.832Contact Map0.152
2nq2A20.926837.10.837Contact Map0.288
2qi9A20.93929.70.845Contact Map0.301
3rlbA20.975614.80.865Contact Map0.178
4hzuS10.975614.20.866Contact Map0.202
3b9wA10.97569.30.877Contact Map0.087
3p5nA20.96346.90.884Contact Map0.294
4huqS10.98784.50.894Contact Map0.217
2gfpA20.90244.40.894Contact Map0.247
1pw4A10.91464.10.896Contact Map0.167

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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