| UniProt: | P52096 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13224 | ||
| Length: | 129 (128) | ||
| Sequences: | 4545 | ||
| Seq/Len: | 35.51 |
| YAER
Paralog alert: 0.72 [within 20: 0.02] - ratio of genomes with paralogs Cluster includes: LGUL YAER |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 22_A | 26_D | 5.664 | 1.00 | |
| 91_A | 95_S | 3.581 | 1.00 | |
| 92_H | 96_H | 3.392 | 1.00 | |
| 85_D | 88_A | 2.993 | 1.00 | |
| 16_D | 19_V | 2.834 | 1.00 | |
| 90_V | 114_T | 2.487 | 1.00 | |
| 87_D | 112_R | 2.41 | 1.00 | |
| 26_D | 96_H | 2.356 | 1.00 | |
| 20_S | 120_D | 2.275 | 1.00 | |
| 99_K | 117_N | 1.991 | 1.00 | |
| 90_V | 94_E | 1.975 | 1.00 | |
| 14_A | 20_S | 1.973 | 1.00 | |
| 31_T | 49_A | 1.899 | 1.00 | |
| 27_I | 96_H | 1.897 | 1.00 | |
| 91_A | 94_E | 1.896 | 1.00 | |
| 21_K | 25_C | 1.833 | 1.00 | |
| 78_H | 125_E | 1.811 | 1.00 | |
| 9_H | 78_H | 1.763 | 1.00 | |
| 24_Y | 118_D | 1.743 | 1.00 | |
| 6_Q | 82_S | 1.742 | 1.00 | |
| 89_A | 92_H | 1.73 | 1.00 | |
| 93_L | 98_V | 1.71 | 1.00 | |
| 19_V | 120_D | 1.709 | 1.00 | |
| 33_Q | 49_A | 1.662 | 1.00 | |
| 82_S | 129_Q | 1.649 | 1.00 | |
| 118_D | 122_L | 1.644 | 1.00 | |
| 18_A | 22_A | 1.577 | 1.00 | |
| 5_K | 84_D | 1.563 | 1.00 | |
| 112_R | 128_E | 1.5 | 1.00 | |
| 32_L | 35_E | 1.485 | 1.00 | |
| 15_T | 120_D | 1.452 | 1.00 | |
| 9_H | 80_A | 1.449 | 1.00 | |
| 19_V | 22_A | 1.424 | 1.00 | |
| 87_D | 91_A | 1.416 | 1.00 | |
| 6_Q | 53_Q | 1.382 | 0.99 | |
| 116_F | 124_L | 1.37 | 0.99 | |
| 9_H | 125_E | 1.357 | 0.99 | |
| 114_T | 126_L | 1.341 | 0.99 | |
| 117_N | 123_P | 1.293 | 0.99 | |
| 21_K | 35_E | 1.287 | 0.99 | |
| 98_V | 116_F | 1.281 | 0.99 | |
| 93_L | 126_L | 1.256 | 0.99 | |
| 25_C | 31_T | 1.255 | 0.99 | |
| 90_V | 100_C | 1.241 | 0.98 | |
| 116_F | 126_L | 1.228 | 0.98 | |
| 83_V | 89_A | 1.227 | 0.98 | |
| 21_K | 32_L | 1.194 | 0.98 | |
| 8_H | 82_S | 1.194 | 0.98 | |
| 23_F | 119_P | 1.188 | 0.98 | |
| 94_E | 100_C | 1.179 | 0.98 | |
| 88_A | 91_A | 1.145 | 0.97 | |
| 25_C | 32_L | 1.134 | 0.97 | |
| 88_A | 92_H | 1.126 | 0.97 | |
| 18_A | 35_E | 1.099 | 0.96 | |
| 85_D | 128_E | 1.074 | 0.95 | |
| 22_A | 25_C | 1.073 | 0.95 | |
| 101_E | 117_N | 1.072 | 0.95 | |
| 92_H | 95_S | 1.05 | 0.94 | |
| 15_T | 19_V | 1.046 | 0.94 | |
| 30_F | 50_L | 1.034 | 0.94 | |
| 115_F | 125_E | 1.033 | 0.94 | |
| 42_D | 63_F | 1.028 | 0.94 | |
| 14_A | 58_L | 1.024 | 0.93 | |
| 22_A | 27_I | 1.019 | 0.93 | |
| 32_L | 46_G | 1.016 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2p25A | 1 | 0.9767 | 99.9 | 0.193 | Contact Map | 0.7 |
| 3l7tA | 4 | 0.969 | 99.9 | 0.211 | Contact Map | 0.822 |
| 3hdpA | 1 | 0.9767 | 99.8 | 0.23 | Contact Map | 0.555 |
| 1ss4A | 2 | 0.9845 | 99.8 | 0.233 | Contact Map | 0.814 |
| 2c21A | 6 | 0.9457 | 99.8 | 0.234 | Contact Map | 0.834 |
| 3kolA | 1 | 0.9845 | 99.8 | 0.24 | Contact Map | 0.668 |
| 2rk0A | 2 | 0.9612 | 99.8 | 0.249 | Contact Map | 0.687 |
| 1jc4A | 4 | 0.9922 | 99.8 | 0.252 | Contact Map | 0.773 |
| 1f9zA | 2 | 0.9457 | 99.8 | 0.253 | Contact Map | 0.895 |
| 3gm5A | 1 | 0.9767 | 99.8 | 0.257 | Contact Map | 0.643 |
Sequence Conservation (Image Generated using WebLogo v3)