| UniProt: | P0AC81 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13421 | ||
| Length: | 135 (128) | ||
| Sequences: | 4300 | ||
| Seq/Len: | 33.59 |
| LGUL
Paralog alert: 0.68 [within 20: 0.05] - ratio of genomes with paralogs Cluster includes: LGUL YAER |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 18_D | 22_K | 5.551 | 1.00 | |
| 87_E | 91_Q | 3.559 | 1.00 | |
| 88_K | 92_N | 3.386 | 1.00 | |
| 81_N | 84_E | 3.012 | 1.00 | |
| 12_D | 15_R | 2.749 | 1.00 | |
| 86_C | 111_A | 2.327 | 1.00 | |
| 16_S | 117_D | 2.232 | 1.00 | |
| 83_A | 109_V | 2.231 | 1.00 | |
| 22_K | 92_N | 2.203 | 1.00 | |
| 10_V | 16_S | 2.125 | 1.00 | |
| 95_N | 114_E | 2.036 | 1.00 | |
| 20_Y | 115_D | 1.948 | 1.00 | |
| 90_R | 99_E | 1.925 | 1.00 | |
| 86_C | 90_R | 1.813 | 1.00 | |
| 87_E | 90_R | 1.801 | 1.00 | |
| 23_V | 92_N | 1.703 | 1.00 | |
| 89_I | 94_G | 1.658 | 1.00 | |
| 2_R | 78_S | 1.634 | 1.00 | |
| 78_S | 126_E | 1.633 | 1.00 | |
| 14_Q | 18_D | 1.612 | 1.00 | |
| 85_A | 88_K | 1.598 | 1.00 | |
| 28_L | 31_T | 1.578 | 1.00 | |
| 5_H | 74_H | 1.574 | 1.00 | |
| 15_R | 117_D | 1.503 | 1.00 | |
| 29_L | 45_G | 1.496 | 1.00 | |
| 17_I | 21_T | 1.487 | 1.00 | |
| 74_H | 122_E | 1.459 | 1.00 | |
| 83_A | 87_E | 1.457 | 1.00 | |
| 27_K | 45_G | 1.45 | 1.00 | |
| 2_R | 52_E | 1.415 | 1.00 | |
| 31_T | 40_S | 1.401 | 0.99 | |
| 115_D | 119_Y | 1.363 | 0.99 | |
| 114_E | 120_K | 1.358 | 0.99 | |
| 109_V | 125_E | 1.341 | 0.99 | |
| 86_C | 96_V | 1.338 | 0.99 | |
| 4_L | 78_S | 1.324 | 0.99 | |
| 79_V | 85_A | 1.303 | 0.99 | |
| 40_S | 59_Y | 1.289 | 0.99 | |
| 11_G | 117_D | 1.261 | 0.99 | |
| 89_I | 123_L | 1.261 | 0.99 | |
| 13_L | 42_A | 1.255 | 0.99 | |
| 17_I | 42_A | 1.255 | 0.99 | |
| 17_I | 31_T | 1.25 | 0.99 | |
| 14_Q | 31_T | 1.238 | 0.98 | |
| 90_R | 96_V | 1.223 | 0.98 | |
| 47_G | 52_E | 1.223 | 0.98 | |
| 17_I | 28_L | 1.202 | 0.98 | |
| 84_E | 87_E | 1.186 | 0.98 | |
| 15_R | 18_D | 1.185 | 0.98 | |
| 5_H | 76_A | 1.175 | 0.98 | |
| 38_K | 62_G | 1.161 | 0.97 | |
| 28_L | 42_A | 1.14 | 0.97 | |
| 17_I | 44_V | 1.128 | 0.97 | |
| 94_G | 113_V | 1.1 | 0.96 | |
| 18_D | 21_T | 1.1 | 0.96 | |
| 26_M | 46_Y | 1.1 | 0.96 | |
| 113_V | 121_I | 1.097 | 0.96 | |
| 21_T | 28_L | 1.094 | 0.96 | |
| 21_T | 27_K | 1.071 | 0.95 | |
| 33_E | 40_S | 1.071 | 0.95 | |
| 19_F | 116_P | 1.058 | 0.95 | |
| 113_V | 123_L | 1.056 | 0.95 | |
| 112_F | 122_E | 1.041 | 0.94 | |
| 11_G | 15_R | 1.04 | 0.94 | |
| 16_S | 57_L | 1.019 | 0.93 | |
| 111_A | 123_L | 1.008 | 0.93 | |
| 18_D | 23_V | 1.006 | 0.93 | |
| 43_F | 56_E | 1.005 | 0.93 | |
| 5_H | 122_E | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1f9zA | 2 | 1 | 99.9 | 0.254 | Contact Map | 0.884 |
| 3hdpA | 1 | 0.8963 | 99.9 | 0.289 | Contact Map | 0.559 |
| 1ss4A | 2 | 0.9333 | 99.9 | 0.29 | Contact Map | 0.809 |
| 2c21A | 6 | 0.963 | 99.8 | 0.308 | Contact Map | 0.85 |
| 3rmuA | 4 | 0.9037 | 99.8 | 0.311 | Contact Map | 0.707 |
| 3gm5A | 1 | 0.8889 | 99.8 | 0.315 | Contact Map | 0.635 |
| 3e5dA | 1 | 0.8963 | 99.8 | 0.316 | Contact Map | 0.739 |
| 1jc4A | 4 | 0.9481 | 99.8 | 0.316 | Contact Map | 0.791 |
| 2p25A | 1 | 0.8889 | 99.8 | 0.319 | Contact Map | 0.713 |
| 3w0tA | 4 | 0.9704 | 99.8 | 0.323 | Contact Map | 0.863 |
Sequence Conservation (Image Generated using WebLogo v3)