| UniProt: | P11664 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11161 | ||
| Length: | 237 (215) | ||
| Sequences: | 1827 | ||
| Seq/Len: | 8.50 |
| YGGC
Paralog alert: 0.64 [within 20: 0.01] - ratio of genomes with paralogs Cluster includes: URK YGGC |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 129_D | 136_V | 4.633 | 1.00 | |
| 84_F | 114_N | 2.895 | 1.00 | |
| 195_T | 198_V | 2.892 | 1.00 | |
| 87_Y | 90_W | 2.522 | 1.00 | |
| 47_F | 168_C | 2.424 | 1.00 | |
| 90_W | 93_A | 2.291 | 1.00 | |
| 182_R | 204_A | 2.29 | 1.00 | |
| 110_K | 114_N | 2.271 | 1.00 | |
| 107_D | 135_P | 2.259 | 1.00 | |
| 113_E | 117_Q | 2.259 | 1.00 | |
| 124_T | 141_H | 2.112 | 1.00 | |
| 111_L | 149_V | 2.019 | 1.00 | |
| 49_C | 155_L | 1.895 | 1.00 | |
| 157_D | 163_E | 1.874 | 1.00 | |
| 129_D | 132_K | 1.854 | 1.00 | |
| 116_R | 163_E | 1.83 | 1.00 | |
| 116_R | 167_F | 1.815 | 1.00 | |
| 196_R | 200_E | 1.809 | 1.00 | |
| 119_V | 169_D | 1.73 | 1.00 | |
| 178_A | 212_E | 1.711 | 1.00 | |
| 165_A | 220_Q | 1.708 | 1.00 | |
| 46_V | 146_L | 1.69 | 1.00 | |
| 149_V | 168_C | 1.635 | 1.00 | |
| 90_W | 94_H | 1.613 | 1.00 | |
| 92_D | 97_R | 1.554 | 1.00 | |
| 19_E | 23_N | 1.522 | 1.00 | |
| 175_H | 218_S | 1.501 | 1.00 | |
| 159_E | 162_L | 1.5 | 1.00 | |
| 183_E | 187_S | 1.499 | 1.00 | |
| 88_N | 100_K | 1.469 | 0.99 | |
| 81_M | 154_L | 1.454 | 0.99 | |
| 164_L | 168_C | 1.452 | 0.99 | |
| 67_A | 78_T | 1.452 | 0.99 | |
| 122_D | 143_T | 1.444 | 0.99 | |
| 65_Y | 68_Q | 1.439 | 0.99 | |
| 118_V | 147_V | 1.417 | 0.99 | |
| 96_L | 104_E | 1.408 | 0.99 | |
| 124_T | 140_L | 1.394 | 0.99 | |
| 36_Q | 159_E | 1.386 | 0.99 | |
| 122_D | 141_H | 1.376 | 0.99 | |
| 114_N | 117_Q | 1.371 | 0.99 | |
| 128_Y | 133_H | 1.367 | 0.99 | |
| 22_E | 26_K | 1.354 | 0.99 | |
| 89_S | 134_D | 1.354 | 0.99 | |
| 19_E | 22_E | 1.344 | 0.99 | |
| 155_L | 171_S | 1.344 | 0.99 | |
| 36_Q | 160_K | 1.313 | 0.99 | |
| 178_A | 208_G | 1.312 | 0.99 | |
| 50_A | 54_T | 1.3 | 0.98 | |
| 78_T | 148_I | 1.264 | 0.98 | |
| 87_Y | 134_D | 1.255 | 0.98 | |
| 99_F | 128_Y | 1.249 | 0.98 | |
| 26_K | 30_H | 1.228 | 0.98 | |
| 208_G | 212_E | 1.225 | 0.98 | |
| 75_A | 145_P | 1.223 | 0.98 | |
| 83_G | 152_N | 1.21 | 0.97 | |
| 197_Q | 201_A | 1.191 | 0.97 | |
| 127_Q | 139_A | 1.187 | 0.97 | |
| 166_S | 220_Q | 1.187 | 0.97 | |
| 29_L | 32_L | 1.183 | 0.97 | |
| 67_A | 148_I | 1.178 | 0.97 | |
| 182_R | 186_I | 1.171 | 0.97 | |
| 194_L | 202_F | 1.17 | 0.97 | |
| 207_D | 210_N | 1.167 | 0.96 | |
| 130_R | 192_G | 1.164 | 0.96 | |
| 109_A | 113_E | 1.159 | 0.96 | |
| 81_M | 108_V | 1.158 | 0.96 | |
| 124_T | 139_A | 1.157 | 0.96 | |
| 45_V | 119_V | 1.152 | 0.96 | |
| 132_K | 136_V | 1.15 | 0.96 | |
| 48_L | 59_L | 1.138 | 0.96 | |
| 39_N | 179_Q | 1.137 | 0.96 | |
| 117_Q | 120_E | 1.122 | 0.95 | |
| 127_Q | 138_D | 1.111 | 0.95 | |
| 175_H | 226_E | 1.11 | 0.95 | |
| 152_N | 155_L | 1.098 | 0.95 | |
| 84_F | 111_L | 1.094 | 0.94 | |
| 218_S | 221_A | 1.084 | 0.94 | |
| 88_N | 133_H | 1.08 | 0.94 | |
| 85_H | 185_L | 1.076 | 0.94 | |
| 43_R | 128_Y | 1.072 | 0.94 | |
| 50_A | 56_K | 1.071 | 0.94 | |
| 80_P | 83_G | 1.065 | 0.93 | |
| 29_L | 70_D | 1.064 | 0.93 | |
| 187_S | 191_A | 1.058 | 0.93 | |
| 96_L | 100_K | 1.056 | 0.93 | |
| 59_L | 174_I | 1.054 | 0.93 | |
| 130_R | 185_L | 1.049 | 0.93 | |
| 88_N | 97_R | 1.045 | 0.92 | |
| 207_D | 211_V | 1.044 | 0.92 | |
| 18_N | 22_E | 1.043 | 0.92 | |
| 92_D | 205_R | 1.042 | 0.92 | |
| 155_L | 221_A | 1.041 | 0.92 | |
| 17_Q | 20_E | 1.025 | 0.91 | |
| 23_N | 26_K | 1.022 | 0.91 | |
| 178_A | 181_L | 1.021 | 0.91 | |
| 112_T | 164_L | 1.017 | 0.91 | |
| 36_Q | 162_L | 1.015 | 0.91 | |
| 81_M | 106_F | 1.013 | 0.91 | |
| 50_A | 55_G | 1.011 | 0.91 | |
| 124_T | 138_D | 1.01 | 0.91 | |
| 130_R | 133_H | 1.009 | 0.91 | |
| 180_I | 183_E | 1.004 | 0.90 | |
| 36_Q | 192_G | 1.004 | 0.90 | |
| 190_I | 199_A | 1.003 | 0.90 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2ga8A | 1 | 0.903 | 100 | 0.441 | Contact Map | 0.577 |
| 3tqcA | 2 | 0.9873 | 100 | 0.474 | Contact Map | 0.725 |
| 4bfzA | 2 | 0.9831 | 100 | 0.534 | Contact Map | 0.692 |
| 2jeoA | 1 | 0.8903 | 99.9 | 0.574 | Contact Map | 0.689 |
| 1a7jA | 1 | 0.8143 | 99.9 | 0.576 | Contact Map | 0.489 |
| 1odfA | 1 | 0.9325 | 99.9 | 0.58 | Contact Map | 0.497 |
| 1rz3A | 1 | 0.8143 | 99.9 | 0.582 | Contact Map | 0.63 |
| 4gi7A | 8 | 0.9873 | 99.9 | 0.586 | Contact Map | 0.728 |
| 3c8uA | 1 | 0.8608 | 99.9 | 0.616 | Contact Map | 0.633 |
| 1uj2A | 2 | 0.8776 | 99.9 | 0.634 | Contact Map | 0.744 |
Sequence Conservation (Image Generated using WebLogo v3)