| UniProt: | P0C058 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11535 | ||
| Length: | 142 (137) | ||
| Sequences: | 1811 | ||
| Seq/Len: | 13.22 |
| IBPB
Paralog alert: 0.57 [within 20: 0.21] - ratio of genomes with paralogs Cluster includes: IBPA IBPB |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 49_L | 70_V | 2.913 | 1.00 | |
| 72_G | 93_F | 2.712 | 1.00 | |
| 51_L | 59_L | 2.62 | 1.00 | |
| 60_E | 131_R | 2.519 | 1.00 | |
| 107_G | 135_S | 2.453 | 1.00 | |
| 35_Y | 97_F | 2.439 | 1.00 | |
| 55_R | 112_N | 2.296 | 1.00 | |
| 60_E | 71_K | 2.238 | 1.00 | |
| 41_D | 44_H | 2.213 | 1.00 | |
| 50_A | 114_L | 2.187 | 1.00 | |
| 50_A | 88_L | 2.14 | 1.00 | |
| 71_K | 94_S | 2.044 | 1.00 | |
| 51_L | 110_F | 2.041 | 1.00 | |
| 36_N | 88_L | 2.036 | 1.00 | |
| 44_H | 118_D | 1.966 | 1.00 | |
| 35_Y | 49_L | 1.908 | 1.00 | |
| 55_R | 58_D | 1.896 | 1.00 | |
| 125_E | 128_A | 1.861 | 1.00 | |
| 87_G | 95_L | 1.828 | 1.00 | |
| 46_R | 116_H | 1.82 | 1.00 | |
| 104_E | 122_N | 1.813 | 1.00 | |
| 37_I | 47_I | 1.787 | 1.00 | |
| 48_T | 116_H | 1.694 | 1.00 | |
| 73_T | 92_P | 1.66 | 1.00 | |
| 69_S | 96_S | 1.659 | 1.00 | |
| 33_P | 93_F | 1.652 | 1.00 | |
| 36_N | 86_Q | 1.625 | 1.00 | |
| 103_M | 119_L | 1.607 | 1.00 | |
| 40_S | 121_R | 1.575 | 1.00 | |
| 63_L | 99_L | 1.559 | 1.00 | |
| 35_Y | 70_V | 1.549 | 1.00 | |
| 56_Q | 112_N | 1.531 | 1.00 | |
| 68_L | 117_I | 1.514 | 1.00 | |
| 36_N | 50_A | 1.48 | 1.00 | |
| 59_L | 110_F | 1.42 | 1.00 | |
| 41_D | 46_R | 1.37 | 0.99 | |
| 87_G | 91_Q | 1.362 | 0.99 | |
| 45_Y | 101_E | 1.357 | 0.99 | |
| 109_T | 135_S | 1.325 | 0.99 | |
| 37_I | 45_Y | 1.281 | 0.99 | |
| 43_N | 128_A | 1.22 | 0.98 | |
| 39_K | 46_R | 1.214 | 0.98 | |
| 62_Q | 69_S | 1.214 | 0.98 | |
| 31_S | 72_G | 1.158 | 0.97 | |
| 32_F | 36_N | 1.153 | 0.97 | |
| 55_R | 111_V | 1.152 | 0.97 | |
| 72_G | 91_Q | 1.151 | 0.97 | |
| 46_R | 118_D | 1.146 | 0.97 | |
| 45_Y | 84_L | 1.127 | 0.97 | |
| 45_Y | 97_F | 1.084 | 0.96 | |
| 33_P | 72_G | 1.082 | 0.96 | |
| 18_K | 22_A | 1.076 | 0.95 | |
| 77_P | 81_K | 1.071 | 0.95 | |
| 99_L | 119_L | 1.066 | 0.95 | |
| 64_E | 67_R | 1.059 | 0.95 | |
| 48_T | 114_L | 1.052 | 0.95 | |
| 61_I | 108_A | 1.039 | 0.94 | |
| 52_A | 88_L | 1.033 | 0.94 | |
| 54_F | 72_G | 1.011 | 0.93 | |
| 8_P | 11_R | 1.004 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4eldA | 2 | 0.9155 | 100 | 0.244 | Contact Map | 0.737 |
| 3w1zA | 4 | 0.9014 | 100 | 0.246 | Contact Map | 0.773 |
| 1gmeA | 4 | 0.9437 | 100 | 0.265 | Contact Map | 0.736 |
| 3aabA | 2 | 0.838 | 99.9 | 0.338 | Contact Map | 0.728 |
| 3glaA | 2 | 0.6761 | 99.9 | 0.365 | Contact Map | 0.778 |
| 4feiA | 1 | 0.7042 | 99.9 | 0.366 | Contact Map | 0.597 |
| 2klrA | 2 | 0.9507 | 99.9 | 0.394 | Contact Map | 0.52 |
| 2bolA | 2 | 0.9296 | 99.9 | 0.398 | Contact Map | 0.527 |
| 3l1eA | 1 | 0.7042 | 99.9 | 0.416 | Contact Map | 0.652 |
| 2wj5A | 1 | 0.6901 | 99.9 | 0.428 | Contact Map | 0.517 |
Sequence Conservation (Image Generated using WebLogo v3)