| UniProt: | P0C054 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11534 | ||
| Length: | 137 (136) | ||
| Sequences: | 2245 | ||
| Seq/Len: | 16.51 |
| IBPA
Paralog alert: 0.54 [within 20: 0.19] - ratio of genomes with paralogs Cluster includes: IBPA IBPB |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 51_I | 72_V | 3.217 | 1.00 | |
| 62_E | 133_R | 2.857 | 1.00 | |
| 109_G | 137_N | 2.679 | 1.00 | |
| 46_H | 120_D | 2.638 | 1.00 | |
| 62_E | 73_K | 2.625 | 1.00 | |
| 43_D | 46_H | 2.417 | 1.00 | |
| 37_Y | 99_F | 2.396 | 1.00 | |
| 52_A | 90_I | 2.276 | 1.00 | |
| 127_E | 130_K | 2.226 | 1.00 | |
| 74_G | 95_F | 2.078 | 1.00 | |
| 52_A | 116_L | 2.077 | 1.00 | |
| 53_V | 61_L | 2.023 | 1.00 | |
| 57_A | 114_N | 1.988 | 1.00 | |
| 48_R | 118_Y | 1.898 | 1.00 | |
| 73_K | 96_E | 1.866 | 1.00 | |
| 53_V | 112_L | 1.84 | 1.00 | |
| 57_A | 60_E | 1.814 | 1.00 | |
| 89_G | 97_R | 1.78 | 1.00 | |
| 42_V | 123_R | 1.774 | 1.00 | |
| 50_A | 118_Y | 1.768 | 1.00 | |
| 61_L | 112_L | 1.748 | 1.00 | |
| 65_A | 101_L | 1.745 | 1.00 | |
| 75_A | 94_N | 1.73 | 1.00 | |
| 37_Y | 51_I | 1.683 | 1.00 | |
| 35_P | 95_F | 1.641 | 1.00 | |
| 105_I | 121_L | 1.639 | 1.00 | |
| 43_D | 48_R | 1.632 | 1.00 | |
| 106_H | 124_V | 1.587 | 1.00 | |
| 38_N | 90_I | 1.58 | 1.00 | |
| 71_V | 98_K | 1.56 | 1.00 | |
| 38_N | 88_Q | 1.44 | 1.00 | |
| 111_N | 137_N | 1.428 | 1.00 | |
| 58_E | 114_N | 1.396 | 0.99 | |
| 38_N | 52_A | 1.343 | 0.99 | |
| 69_L | 100_Q | 1.319 | 0.99 | |
| 70_L | 119_I | 1.306 | 0.99 | |
| 74_G | 93_R | 1.287 | 0.99 | |
| 39_V | 49_I | 1.272 | 0.99 | |
| 47_Y | 86_L | 1.252 | 0.99 | |
| 73_K | 94_N | 1.22 | 0.98 | |
| 41_L | 48_R | 1.166 | 0.97 | |
| 20_F | 23_L | 1.154 | 0.97 | |
| 47_Y | 103_E | 1.153 | 0.97 | |
| 53_V | 74_G | 1.151 | 0.97 | |
| 18_R | 24_E | 1.147 | 0.97 | |
| 33_G | 74_G | 1.142 | 0.97 | |
| 60_E | 77_A | 1.128 | 0.97 | |
| 85_Y | 88_Q | 1.114 | 0.96 | |
| 34_Y | 38_N | 1.107 | 0.96 | |
| 56_F | 74_G | 1.101 | 0.96 | |
| 37_Y | 72_V | 1.097 | 0.96 | |
| 64_T | 133_R | 1.092 | 0.96 | |
| 19_L | 24_E | 1.073 | 0.95 | |
| 38_N | 53_V | 1.063 | 0.95 | |
| 69_L | 98_K | 1.053 | 0.95 | |
| 58_E | 98_K | 1.05 | 0.94 | |
| 102_A | 105_I | 1.031 | 0.94 | |
| 49_I | 99_F | 1.03 | 0.94 | |
| 20_F | 26_N | 1.019 | 0.93 | |
| 24_E | 28_S | 1.013 | 0.93 | |
| 61_L | 90_I | 1.012 | 0.93 | |
| 18_R | 22_H | 1.011 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4eldA | 2 | 0.9416 | 100 | 0.2 | Contact Map | 0.707 |
| 3w1zA | 4 | 0.9416 | 100 | 0.228 | Contact Map | 0.749 |
| 1gmeA | 4 | 0.9635 | 100 | 0.241 | Contact Map | 0.726 |
| 3aabA | 2 | 0.8686 | 99.9 | 0.298 | Contact Map | 0.73 |
| 4feiA | 1 | 0.7226 | 99.9 | 0.331 | Contact Map | 0.606 |
| 3glaA | 2 | 0.7007 | 99.9 | 0.333 | Contact Map | 0.759 |
| 2bolA | 2 | 0.927 | 99.9 | 0.354 | Contact Map | 0.479 |
| 2klrA | 2 | 0.9489 | 99.9 | 0.364 | Contact Map | 0.477 |
| 3l1eA | 1 | 0.7226 | 99.9 | 0.383 | Contact Map | 0.637 |
| 2wj5A | 1 | 0.6861 | 99.9 | 0.405 | Contact Map | 0.518 |
Sequence Conservation (Image Generated using WebLogo v3)