| UniProt: | P0AGB6 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11897 | ||
| Length: | 191 (182) | ||
| Sequences: | 13420 | ||
| Seq/Len: | 73.74 |
| RPOE
Paralog alert: 0.65 [within 20: 0.13] - ratio of genomes with paralogs Cluster includes: FECI RPOE |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 56_K | 81_T | 3.295 | 1.00 | |
| 149_R | 159_I | 2.736 | 1.00 | |
| 32_K | 71_Y | 2.516 | 1.00 | |
| 157_E | 167_V | 2.45 | 1.00 | |
| 37_V | 78_A | 2.324 | 1.00 | |
| 142_L | 180_A | 2.287 | 1.00 | |
| 137_S | 184_K | 2.234 | 1.00 | |
| 166_P | 169_T | 2.124 | 1.00 | |
| 154_L | 162_I | 2.12 | 1.00 | |
| 53_A | 78_A | 2.095 | 1.00 | |
| 60_A | 63_S | 2.057 | 1.00 | |
| 141_D | 173_R | 2.047 | 1.00 | |
| 79_V | 83_K | 1.96 | 1.00 | |
| 168_G | 171_R | 1.95 | 1.00 | |
| 44_G | 47_P | 1.922 | 1.00 | |
| 40_Y | 82_A | 1.856 | 1.00 | |
| 42_P | 45_D | 1.853 | 1.00 | |
| 134_T | 184_K | 1.81 | 1.00 | |
| 36_L | 75_Y | 1.724 | 1.00 | |
| 45_D | 85_Y | 1.713 | 1.00 | |
| 142_L | 173_R | 1.711 | 1.00 | |
| 84_N | 87_V | 1.703 | 1.00 | |
| 13_R | 18_D | 1.696 | 1.00 | |
| 33_V | 50_V | 1.686 | 1.00 | |
| 145_A | 174_I | 1.67 | 1.00 | |
| 169_T | 173_R | 1.67 | 1.00 | |
| 165_C | 173_R | 1.665 | 1.00 | |
| 156_Y | 174_I | 1.659 | 1.00 | |
| 23_N | 27_V | 1.653 | 1.00 | |
| 57_A | 74_L | 1.631 | 1.00 | |
| 69_A | 72_T | 1.631 | 1.00 | |
| 76_R | 80_N | 1.63 | 1.00 | |
| 150_E | 178_R | 1.627 | 1.00 | |
| 156_Y | 167_V | 1.607 | 1.00 | |
| 38_S | 43_S | 1.606 | 1.00 | |
| 155_S | 158_E | 1.584 | 1.00 | |
| 156_Y | 171_R | 1.583 | 1.00 | |
| 76_R | 79_V | 1.577 | 1.00 | |
| 175_F | 179_E | 1.573 | 1.00 | |
| 81_T | 84_N | 1.561 | 1.00 | |
| 139_P | 142_L | 1.558 | 1.00 | |
| 143_R | 147_T | 1.535 | 1.00 | |
| 169_T | 172_S | 1.528 | 1.00 | |
| 148_L | 162_I | 1.527 | 1.00 | |
| 33_V | 78_A | 1.518 | 1.00 | |
| 41_V | 49_V | 1.49 | 1.00 | |
| 180_A | 184_K | 1.473 | 1.00 | |
| 56_K | 84_N | 1.407 | 0.99 | |
| 157_E | 161_A | 1.401 | 0.99 | |
| 24_L | 28_R | 1.392 | 0.99 | |
| 49_V | 85_Y | 1.389 | 0.99 | |
| 80_N | 83_K | 1.381 | 0.99 | |
| 145_A | 173_R | 1.36 | 0.99 | |
| 52_E | 81_T | 1.359 | 0.99 | |
| 37_V | 82_A | 1.319 | 0.99 | |
| 43_S | 47_P | 1.315 | 0.99 | |
| 26_V | 54_F | 1.304 | 0.99 | |
| 68_S | 72_T | 1.297 | 0.99 | |
| 167_V | 171_R | 1.294 | 0.99 | |
| 49_V | 81_T | 1.292 | 0.99 | |
| 37_V | 49_V | 1.289 | 0.99 | |
| 34_A | 38_S | 1.278 | 0.99 | |
| 7_D | 28_R | 1.251 | 0.99 | |
| 154_L | 158_E | 1.234 | 0.98 | |
| 32_K | 75_Y | 1.223 | 0.98 | |
| 34_A | 47_P | 1.218 | 0.98 | |
| 165_C | 170_V | 1.217 | 0.98 | |
| 29_Y | 54_F | 1.213 | 0.98 | |
| 149_R | 156_Y | 1.195 | 0.98 | |
| 37_V | 50_V | 1.188 | 0.98 | |
| 174_I | 178_R | 1.187 | 0.98 | |
| 159_I | 170_V | 1.185 | 0.98 | |
| 53_A | 77_I | 1.183 | 0.98 | |
| 34_A | 43_S | 1.179 | 0.98 | |
| 148_L | 154_L | 1.178 | 0.98 | |
| 41_V | 82_A | 1.17 | 0.97 | |
| 36_L | 79_V | 1.161 | 0.97 | |
| 172_S | 175_F | 1.161 | 0.97 | |
| 53_A | 81_T | 1.159 | 0.97 | |
| 168_G | 175_F | 1.15 | 0.97 | |
| 136_E | 143_R | 1.143 | 0.97 | |
| 33_V | 53_A | 1.141 | 0.97 | |
| 172_S | 176_R | 1.14 | 0.97 | |
| 140_E | 144_M | 1.14 | 0.97 | |
| 145_A | 177_A | 1.14 | 0.97 | |
| 57_A | 73_W | 1.138 | 0.97 | |
| 156_Y | 170_V | 1.136 | 0.97 | |
| 134_T | 181_I | 1.127 | 0.97 | |
| 26_V | 30_Q | 1.126 | 0.97 | |
| 142_L | 177_A | 1.121 | 0.97 | |
| 22_F | 58_Y | 1.117 | 0.96 | |
| 71_Y | 75_Y | 1.115 | 0.96 | |
| 123_L | 126_E | 1.11 | 0.96 | |
| 168_G | 172_S | 1.106 | 0.96 | |
| 83_K | 86_L | 1.105 | 0.96 | |
| 29_Y | 74_L | 1.103 | 0.96 | |
| 145_A | 165_C | 1.094 | 0.96 | |
| 82_A | 86_L | 1.084 | 0.96 | |
| 55_I | 59_R | 1.075 | 0.95 | |
| 29_Y | 71_Y | 1.064 | 0.95 | |
| 45_D | 89_Q | 1.056 | 0.95 | |
| 38_S | 46_V | 1.055 | 0.95 | |
| 64_F | 68_S | 1.013 | 0.93 | |
| 25_L | 70_F | 1.011 | 0.93 | |
| 142_L | 145_A | 1.011 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1or7A | 2 | 0.9948 | 100 | 0.115 | Contact Map | 0.831 |
| 3vdoA | 1 | 0.9476 | 100 | 0.167 | Contact Map | 0.804 |
| 2q1zA | 2 | 0.9162 | 100 | 0.187 | Contact Map | 0.494 |
| 4kn7X | 2 | 0.9895 | 100 | 0.257 | Contact Map | 0.508 |
| 3n0rA | 1 | 0.8534 | 100 | 0.263 | Contact Map | 0.678 |
| 1l0oC | 1 | 0.9476 | 100 | 0.265 | Contact Map | |
| 4ljzF | 2 | 0.9895 | 100 | 0.266 | Contact Map | 0.528 |
| 1rp3A | 4 | 0.9319 | 100 | 0.266 | Contact Map | 0.707 |
| 2lfwA | 1 | 0.7644 | 100 | 0.268 | Contact Map | 0.616 |
| 2a6hF | 2 | 0.9895 | 99.9 | 0.335 | Contact Map | 0.455 |
Sequence Conservation (Image Generated using WebLogo v3)