| UniProt: | P0AEZ3 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10597 | ||
| Length: | 270 (248) | ||
| Sequences: | 8928 | ||
| Seq/Len: | 36.00 |
| MIND
Paralog alert: 0.85 [within 20: 0.11] - ratio of genomes with paralogs Cluster includes: BCSQ MIND |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 20_S | 118_V | 4.412 | 1.00 | |
| 84_Y | 114_F | 4.367 | 1.00 | |
| 212_P | 238_A | 4.143 | 1.00 | |
| 30_K | 244_E | 3.623 | 1.00 | |
| 19_S | 239_Y | 3.588 | 1.00 | |
| 6_V | 136_A | 3.41 | 1.00 | |
| 27_L | 116_F | 3.027 | 1.00 | |
| 32_K | 116_F | 2.864 | 1.00 | |
| 29_Q | 240_A | 2.802 | 1.00 | |
| 226_P | 229_L | 2.721 | 1.00 | |
| 3_R | 138_E | 2.672 | 1.00 | |
| 36_V | 46_L | 2.641 | 1.00 | |
| 35_V | 114_F | 2.57 | 1.00 | |
| 182_R | 213_E | 2.426 | 1.00 | |
| 20_S | 36_V | 2.42 | 1.00 | |
| 144_N | 182_R | 2.372 | 1.00 | |
| 21_A | 46_L | 2.367 | 1.00 | |
| 7_V | 23_I | 2.305 | 1.00 | |
| 179_L | 242_T | 2.164 | 1.00 | |
| 209_G | 245_R | 2.099 | 1.00 | |
| 197_E | 201_E | 2.085 | 1.00 | |
| 24_A | 36_V | 2.059 | 1.00 | |
| 216_S | 219_R | 2.056 | 1.00 | |
| 19_S | 179_L | 2.035 | 1.00 | |
| 209_G | 242_T | 2.027 | 1.00 | |
| 26_G | 243_V | 2.005 | 1.00 | |
| 24_A | 118_V | 1.956 | 1.00 | |
| 30_K | 240_A | 1.941 | 1.00 | |
| 33_K | 115_E | 1.939 | 1.00 | |
| 27_L | 118_V | 1.92 | 1.00 | |
| 71_N | 113_D | 1.904 | 1.00 | |
| 23_I | 243_V | 1.901 | 1.00 | |
| 49_I | 148_S | 1.797 | 1.00 | |
| 23_I | 246_L | 1.763 | 1.00 | |
| 21_A | 49_I | 1.693 | 1.00 | |
| 24_A | 46_L | 1.658 | 1.00 | |
| 7_V | 140_I | 1.642 | 1.00 | |
| 233_A | 236_G | 1.629 | 1.00 | |
| 7_V | 20_S | 1.629 | 1.00 | |
| 26_G | 228_I | 1.613 | 1.00 | |
| 48_L | 151_R | 1.604 | 1.00 | |
| 187_R | 190_R | 1.604 | 1.00 | |
| 237_K | 240_A | 1.567 | 1.00 | |
| 28_A | 82_N | 1.559 | 1.00 | |
| 32_K | 115_E | 1.552 | 1.00 | |
| 184_N | 213_E | 1.502 | 1.00 | |
| 6_V | 121_S | 1.476 | 1.00 | |
| 28_A | 83_L | 1.463 | 1.00 | |
| 197_E | 210_V | 1.462 | 1.00 | |
| 52_C | 85_I | 1.462 | 1.00 | |
| 69_T | 72_Q | 1.455 | 1.00 | |
| 19_S | 181_T | 1.424 | 1.00 | |
| 50_M | 83_L | 1.418 | 1.00 | |
| 70_L | 86_L | 1.416 | 1.00 | |
| 45_N | 152_D | 1.406 | 0.99 | |
| 140_I | 179_L | 1.398 | 0.99 | |
| 208_V | 245_R | 1.389 | 0.99 | |
| 180_L | 194_L | 1.374 | 0.99 | |
| 76_K | 84_Y | 1.369 | 0.99 | |
| 59_D | 62_N | 1.362 | 0.99 | |
| 198_D | 201_E | 1.358 | 0.99 | |
| 15_G | 181_T | 1.357 | 0.99 | |
| 4_I | 119_C | 1.357 | 0.99 | |
| 39_F | 119_C | 1.355 | 0.99 | |
| 138_E | 177_H | 1.348 | 0.99 | |
| 84_Y | 112_M | 1.344 | 0.99 | |
| 30_K | 247_L | 1.338 | 0.99 | |
| 244_E | 248_G | 1.335 | 0.99 | |
| 183_Y | 210_V | 1.31 | 0.99 | |
| 207_L | 210_V | 1.305 | 0.99 | |
| 219_R | 223_Q | 1.296 | 0.99 | |
| 32_K | 247_L | 1.286 | 0.99 | |
| 225_E | 229_L | 1.264 | 0.99 | |
| 21_A | 50_M | 1.253 | 0.99 | |
| 216_S | 230_D | 1.245 | 0.98 | |
| 148_S | 221_S | 1.24 | 0.98 | |
| 145_P | 180_L | 1.227 | 0.98 | |
| 241_D | 244_E | 1.215 | 0.98 | |
| 158_G | 161_A | 1.21 | 0.98 | |
| 198_D | 202_I | 1.209 | 0.98 | |
| 63_V | 73_A | 1.209 | 0.98 | |
| 214_D | 235_A | 1.208 | 0.98 | |
| 231_I | 236_G | 1.2 | 0.98 | |
| 3_R | 137_D | 1.19 | 0.98 | |
| 146_E | 149_S | 1.189 | 0.98 | |
| 217_V | 235_A | 1.188 | 0.98 | |
| 85_I | 90_Q | 1.182 | 0.98 | |
| 138_E | 176_E | 1.18 | 0.98 | |
| 181_T | 239_Y | 1.179 | 0.98 | |
| 241_D | 245_R | 1.172 | 0.98 | |
| 215_Q | 219_R | 1.172 | 0.98 | |
| 234_D | 237_K | 1.165 | 0.97 | |
| 142_T | 181_T | 1.159 | 0.97 | |
| 39_F | 132_A | 1.156 | 0.97 | |
| 139_A | 160_L | 1.147 | 0.97 | |
| 2_A | 110_K | 1.138 | 0.97 | |
| 35_V | 117_I | 1.136 | 0.97 | |
| 45_N | 148_S | 1.134 | 0.97 | |
| 26_G | 240_A | 1.131 | 0.97 | |
| 230_D | 233_A | 1.123 | 0.97 | |
| 103_A | 107_D | 1.11 | 0.96 | |
| 211_I | 235_A | 1.104 | 0.96 | |
| 27_L | 34_T | 1.102 | 0.96 | |
| 90_Q | 155_R | 1.097 | 0.96 | |
| 116_F | 247_L | 1.094 | 0.96 | |
| 154_D | 202_I | 1.088 | 0.96 | |
| 78_K | 84_Y | 1.082 | 0.96 | |
| 33_K | 113_D | 1.082 | 0.96 | |
| 7_V | 118_V | 1.079 | 0.95 | |
| 4_I | 117_I | 1.079 | 0.95 | |
| 107_D | 110_K | 1.064 | 0.95 | |
| 242_T | 246_L | 1.06 | 0.95 | |
| 11_K | 16_K | 1.059 | 0.95 | |
| 8_T | 121_S | 1.052 | 0.95 | |
| 232_N | 237_K | 1.046 | 0.94 | |
| 42_G | 128_G | 1.04 | 0.94 | |
| 237_K | 241_D | 1.038 | 0.94 | |
| 34_T | 115_E | 1.036 | 0.94 | |
| 24_A | 83_L | 1.034 | 0.94 | |
| 110_K | 137_D | 1.032 | 0.94 | |
| 9_S | 14_V | 1.022 | 0.93 | |
| 74_L | 84_Y | 1.02 | 0.93 | |
| 2_A | 117_I | 1.02 | 0.93 | |
| 144_N | 149_S | 1.018 | 0.93 | |
| 22_A | 25_T | 1.011 | 0.93 | |
| 199_V | 203_L | 1.005 | 0.93 | |
| 14_V | 149_S | 1.004 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1hyqA | 1 | 0.937 | 100 | 0.261 | Contact Map | 0.753 |
| 3q9lA | 2 | 0.963 | 100 | 0.282 | Contact Map | 0.825 |
| 1g3qA | 1 | 0.8704 | 100 | 0.292 | Contact Map | 0.793 |
| 1wcv1 | 1 | 0.9148 | 100 | 0.294 | Contact Map | 0.761 |
| 3pg5A | 4 | 0.9519 | 100 | 0.297 | Contact Map | 0.72 |
| 3ea0A | 2 | 0.8667 | 100 | 0.3 | Contact Map | 0.794 |
| 3endA | 2 | 0.9222 | 100 | 0.306 | Contact Map | 0.709 |
| 3ez2A | 2 | 0.9222 | 100 | 0.314 | Contact Map | 0.676 |
| 3ez9A | 2 | 0.9296 | 100 | 0.317 | Contact Map | 0.596 |
| 2ynmA | 2 | 0.9222 | 100 | 0.321 | Contact Map | 0.716 |
Sequence Conservation (Image Generated using WebLogo v3)