| UniProt: | P0AEE3 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11652 | ||
| Length: | 355 (312) | ||
| Sequences: | 4047 | ||
| Seq/Len: | 12.97 |
| DEGS
Paralog alert: 0.60 [within 20: 0.12] - ratio of genomes with paralogs Cluster includes: DEGP DEGQ DEGS |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 207_N | 211_E | 6.087 | 1.00 | |
| 52_R | 150_H | 4.857 | 1.00 | |
| 306_S | 334_V | 4.426 | 1.00 | |
| 335_V | 344_L | 4.172 | 1.00 | |
| 145_A | 239_Q | 4.076 | 1.00 | |
| 95_K | 121_S | 3.301 | 1.00 | |
| 308_D | 325_I | 3.276 | 1.00 | |
| 145_A | 148_V | 3.158 | 1.00 | |
| 330_V | 345_Q | 2.98 | 1.00 | |
| 142_P | 211_E | 2.917 | 1.00 | |
| 116_A | 130_L | 2.867 | 1.00 | |
| 141_I | 212_L | 2.845 | 1.00 | |
| 332_P | 343_T | 2.802 | 1.00 | |
| 334_V | 341_Q | 2.742 | 1.00 | |
| 104_I | 118_L | 2.699 | 1.00 | |
| 147_R | 239_Q | 2.632 | 1.00 | |
| 57_A | 140_T | 2.601 | 1.00 | |
| 129_V | 249_I | 2.591 | 1.00 | |
| 332_P | 345_Q | 2.537 | 1.00 | |
| 196_I | 233_G | 2.531 | 1.00 | |
| 117_L | 133_N | 2.49 | 1.00 | |
| 114_F | 132_I | 2.364 | 1.00 | |
| 92_I | 241_A | 2.347 | 1.00 | |
| 173_I | 190_L | 2.271 | 1.00 | |
| 83_V | 204_A | 2.254 | 1.00 | |
| 306_S | 309_N | 2.244 | 1.00 | |
| 83_V | 215_I | 2.231 | 1.00 | |
| 83_V | 212_L | 2.094 | 1.00 | |
| 143_I | 238_F | 2.054 | 1.00 | |
| 290_D | 294_A | 2.051 | 1.00 | |
| 305_I | 336_M | 1.962 | 1.00 | |
| 259_I | 346_V | 1.961 | 1.00 | |
| 105_I | 113_V | 1.96 | 1.00 | |
| 335_V | 342_L | 1.957 | 1.00 | |
| 334_V | 343_T | 1.95 | 1.00 | |
| 92_I | 245_M | 1.948 | 1.00 | |
| 48_N | 153_D | 1.909 | 1.00 | |
| 204_A | 212_L | 1.883 | 1.00 | |
| 83_V | 141_I | 1.881 | 1.00 | |
| 330_V | 347_T | 1.866 | 1.00 | |
| 284_V | 298_I | 1.864 | 1.00 | |
| 103_Q | 115_E | 1.848 | 1.00 | |
| 127_L | 215_I | 1.835 | 1.00 | |
| 64_R | 103_Q | 1.831 | 1.00 | |
| 306_S | 311_P | 1.827 | 1.00 | |
| 302_D | 337_R | 1.815 | 1.00 | |
| 154_V | 170_Q | 1.803 | 1.00 | |
| 298_I | 335_V | 1.774 | 1.00 | |
| 298_I | 344_L | 1.761 | 1.00 | |
| 298_I | 333_V | 1.753 | 1.00 | |
| 326_R | 329_S | 1.719 | 1.00 | |
| 143_I | 242_T | 1.716 | 1.00 | |
| 262_G | 286_E | 1.715 | 1.00 | |
| 246_D | 250_R | 1.706 | 1.00 | |
| 51_V | 168_I | 1.7 | 1.00 | |
| 90_Y | 119_V | 1.698 | 1.00 | |
| 141_I | 206_V | 1.696 | 1.00 | |
| 313_I | 317_E | 1.685 | 1.00 | |
| 149_P | 213_M | 1.683 | 1.00 | |
| 84_I | 108_L | 1.659 | 1.00 | |
| 325_I | 348_I | 1.625 | 1.00 | |
| 284_V | 304_I | 1.562 | 1.00 | |
| 247_K | 251_D | 1.547 | 1.00 | |
| 84_I | 138_L | 1.536 | 1.00 | |
| 85_M | 245_M | 1.531 | 1.00 | |
| 46_S | 153_D | 1.529 | 1.00 | |
| 307_V | 325_I | 1.504 | 1.00 | |
| 305_I | 341_Q | 1.501 | 1.00 | |
| 48_N | 150_H | 1.489 | 1.00 | |
| 325_I | 329_S | 1.488 | 1.00 | |
| 117_L | 131_K | 1.486 | 1.00 | |
| 54_A | 206_V | 1.484 | 1.00 | |
| 251_D | 255_I | 1.479 | 1.00 | |
| 215_I | 241_A | 1.471 | 1.00 | |
| 305_I | 334_V | 1.464 | 1.00 | |
| 295_N | 349_Q | 1.452 | 1.00 | |
| 265_E | 315_A | 1.444 | 1.00 | |
| 149_P | 190_L | 1.43 | 1.00 | |
| 59_V | 91_I | 1.425 | 1.00 | |
| 258_Y | 292_P | 1.416 | 1.00 | |
| 90_Y | 249_I | 1.404 | 0.99 | |
| 253_R | 350_E | 1.402 | 0.99 | |
| 108_L | 114_F | 1.399 | 0.99 | |
| 242_T | 246_D | 1.392 | 0.99 | |
| 90_Y | 131_K | 1.388 | 0.99 | |
| 146_R | 239_Q | 1.387 | 0.99 | |
| 134_A | 138_L | 1.383 | 0.99 | |
| 47_Y | 154_V | 1.376 | 0.99 | |
| 310_K | 321_Q | 1.363 | 0.99 | |
| 257_G | 327_P | 1.361 | 0.99 | |
| 122_D | 125_T | 1.351 | 0.99 | |
| 144_N | 238_F | 1.341 | 0.99 | |
| 192_T | 205_L | 1.335 | 0.99 | |
| 86_D | 90_Y | 1.325 | 0.99 | |
| 54_A | 141_I | 1.299 | 0.99 | |
| 154_V | 208_S | 1.294 | 0.99 | |
| 108_L | 132_I | 1.286 | 0.99 | |
| 57_A | 141_I | 1.281 | 0.99 | |
| 263_G | 315_A | 1.281 | 0.99 | |
| 280_Q | 311_P | 1.27 | 0.99 | |
| 149_P | 173_I | 1.268 | 0.99 | |
| 255_I | 350_E | 1.266 | 0.99 | |
| 337_R | 342_L | 1.256 | 0.99 | |
| 59_V | 82_G | 1.252 | 0.99 | |
| 82_G | 91_I | 1.251 | 0.99 | |
| 50_A | 206_V | 1.244 | 0.98 | |
| 155_V | 173_I | 1.229 | 0.98 | |
| 91_I | 132_I | 1.219 | 0.98 | |
| 61_V | 130_L | 1.208 | 0.98 | |
| 258_Y | 352_P | 1.206 | 0.98 | |
| 288_S | 291_G | 1.204 | 0.98 | |
| 325_I | 331_I | 1.2 | 0.98 | |
| 280_Q | 313_I | 1.194 | 0.98 | |
| 156_L | 208_S | 1.188 | 0.98 | |
| 267_A | 270_H | 1.187 | 0.98 | |
| 105_I | 115_E | 1.177 | 0.98 | |
| 177_G | 188_N | 1.164 | 0.97 | |
| 157_A | 205_L | 1.163 | 0.97 | |
| 49_L | 150_H | 1.153 | 0.97 | |
| 287_V | 300_V | 1.148 | 0.97 | |
| 90_Y | 129_V | 1.142 | 0.97 | |
| 89_G | 131_K | 1.142 | 0.97 | |
| 289_P | 294_A | 1.14 | 0.97 | |
| 331_I | 348_I | 1.139 | 0.97 | |
| 157_A | 216_N | 1.131 | 0.97 | |
| 144_N | 149_P | 1.129 | 0.97 | |
| 107_A | 113_V | 1.111 | 0.96 | |
| 96_H | 201_S | 1.1 | 0.96 | |
| 108_L | 112_R | 1.096 | 0.96 | |
| 63_N | 104_I | 1.095 | 0.96 | |
| 95_K | 99_N | 1.093 | 0.96 | |
| 314_S | 317_E | 1.089 | 0.96 | |
| 96_H | 126_D | 1.088 | 0.96 | |
| 219_S | 229_P | 1.082 | 0.96 | |
| 176_T | 190_L | 1.077 | 0.95 | |
| 120_G | 248_L | 1.076 | 0.95 | |
| 114_F | 134_A | 1.076 | 0.95 | |
| 50_A | 156_L | 1.07 | 0.95 | |
| 219_S | 230_E | 1.069 | 0.95 | |
| 122_D | 256_R | 1.042 | 0.94 | |
| 308_D | 332_P | 1.041 | 0.94 | |
| 162_Y | 220_F | 1.031 | 0.94 | |
| 336_M | 339_D | 1.03 | 0.94 | |
| 143_I | 212_L | 1.018 | 0.93 | |
| 62_Y | 107_A | 1.016 | 0.93 | |
| 336_M | 341_Q | 1.014 | 0.93 | |
| 168_I | 172_I | 1.013 | 0.93 | |
| 92_I | 238_F | 1.011 | 0.93 | |
| 162_Y | 230_E | 1.008 | 0.93 | |
| 222_K | 230_E | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1ky9A | 2 | 0.9014 | 100 | 0.348 | Contact Map | 0.698 |
| 3pv2A | 4 | 0.9155 | 100 | 0.355 | Contact Map | 0.9 |
| 3stjA | 12 | 0.9014 | 100 | 0.368 | Contact Map | 0.865 |
| 4a8cA | 12 | 0.9014 | 100 | 0.383 | Contact Map | 0.104 |
| 1te0A | 2 | 0.8958 | 100 | 0.414 | Contact Map | 0.804 |
| 3qo6A | 3 | 0.8986 | 100 | 0.423 | Contact Map | 0.905 |
| 1lcyA | 1 | 0.8732 | 100 | 0.424 | Contact Map | 0.813 |
| 4ic6A | 3 | 0.9296 | 100 | 0.431 | Contact Map | 0.815 |
| 3numA | 1 | 0.8789 | 100 | 0.442 | Contact Map | 0.741 |
| 4flnA | 3 | 0.9268 | 100 | 0.465 | Contact Map | 0.808 |
Sequence Conservation (Image Generated using WebLogo v3)