| UniProt: | P0AAT2 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12619 | ||
| Length: | 122 (116) | ||
| Sequences: | 833 | ||
| Seq/Len: | 7.18 |
| YBDF
Paralog alert: 0.41 [within 20: 0.00] - ratio of genomes with paralogs Cluster includes: YBDF YJBR |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 53_N | 77_M | 3.978 | 1.00 | |
| 20_V | 40_F | 3.636 | 1.00 | |
| 17_L | 101_N | 3.455 | 1.00 | |
| 13_L | 101_N | 2.488 | 1.00 | |
| 74_G | 84_S | 2.444 | 1.00 | |
| 71_I | 99_L | 2.289 | 1.00 | |
| 56_S | 61_S | 2.186 | 1.00 | |
| 2_D | 5_S | 2.149 | 1.00 | |
| 65_Q | 83_I | 1.869 | 1.00 | |
| 7_H | 22_L | 1.779 | 1.00 | |
| 23_C | 34_K | 1.756 | 1.00 | |
| 112_A | 115_D | 1.651 | 1.00 | |
| 112_A | 118_R | 1.618 | 1.00 | |
| 60_K | 102_D | 1.605 | 1.00 | |
| 6_L | 52_I | 1.597 | 1.00 | |
| 56_S | 83_I | 1.577 | 1.00 | |
| 14_A | 41_M | 1.548 | 1.00 | |
| 95_L | 99_L | 1.443 | 0.99 | |
| 41_M | 52_I | 1.422 | 0.99 | |
| 41_M | 54_L | 1.413 | 0.99 | |
| 36_G | 108_V | 1.412 | 0.99 | |
| 81_H | 106_L | 1.398 | 0.99 | |
| 78_N | 81_H | 1.383 | 0.99 | |
| 25_P | 34_K | 1.358 | 0.98 | |
| 62_L | 80_K | 1.35 | 0.98 | |
| 108_V | 119_V | 1.32 | 0.98 | |
| 53_N | 84_S | 1.275 | 0.97 | |
| 26_F | 42_L | 1.244 | 0.97 | |
| 13_L | 97_R | 1.237 | 0.97 | |
| 58_P | 81_H | 1.233 | 0.97 | |
| 33_F | 107_V | 1.219 | 0.96 | |
| 108_V | 116_Q | 1.21 | 0.96 | |
| 51_F | 84_S | 1.198 | 0.96 | |
| 72_K | 86_Y | 1.183 | 0.96 | |
| 102_D | 105_N | 1.166 | 0.95 | |
| 35_I | 107_V | 1.147 | 0.94 | |
| 115_D | 118_R | 1.133 | 0.94 | |
| 22_L | 31_D | 1.13 | 0.94 | |
| 4_Q | 7_H | 1.127 | 0.94 | |
| 70_S | 91_I | 1.123 | 0.94 | |
| 38_K | 106_L | 1.114 | 0.93 | |
| 25_P | 76_H | 1.098 | 0.93 | |
| 83_I | 99_L | 1.094 | 0.92 | |
| 103_S | 106_L | 1.092 | 0.92 | |
| 35_I | 108_V | 1.077 | 0.92 | |
| 26_F | 32_V | 1.059 | 0.91 | |
| 55_K | 107_V | 1.055 | 0.91 | |
| 13_L | 17_L | 1.049 | 0.90 | |
| 60_K | 98_D | 1.036 | 0.89 | |
| 6_L | 88_G | 1.028 | 0.89 | |
| 27_G | 32_V | 1.023 | 0.89 | |
| 75_Y | 78_N | 1.022 | 0.89 | |
| 39_I | 42_L | 1.013 | 0.88 | |
| 27_G | 30_F | 1.002 | 0.87 | |
| 93_E | 97_R | 1.002 | 0.87 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2fkiA | 1 | 0.9672 | 100 | 0.166 | Contact Map | 0.487 |
| 2a1vA | 1 | 0.9672 | 100 | 0.181 | Contact Map | 0.679 |
| 2kfpA | 1 | 0.9098 | 100 | 0.243 | Contact Map | 0.426 |
| 2od0A | 2 | 0.8033 | 98.7 | 0.738 | Contact Map | 0.574 |
| 2i8dA | 2 | 0.8361 | 87.8 | 0.878 | Contact Map | 0.47 |
| 2oc6A | 2 | 0.8607 | 83 | 0.886 | Contact Map | 0.504 |
| 2kl4A | 1 | 0.7951 | 83 | 0.886 | Contact Map | 0.367 |
| 4i15A | 2 | 0.9344 | 20.8 | 0.926 | Contact Map | 0.167 |
| 2nx9A | 2 | 0.9426 | 20.5 | 0.927 | Contact Map | 0.179 |
| 3ituA | 4 | 0.9344 | 20.4 | 0.927 | Contact Map | 0.199 |
Sequence Conservation (Image Generated using WebLogo v3)