| UniProt: | P0AA25 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11031 | ||
| Length: | 109 (105) | ||
| Sequences: | 10210 | ||
| Seq/Len: | 97.24 |
| THIO
Paralog alert: 0.85 [within 20: 0.11] - ratio of genomes with paralogs Cluster includes: THIO2 THIO |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 45_E | 97_K | 2.516 | 1.00 | |
| 87_V | 90_T | 2.393 | 1.00 | |
| 49_E | 101_K | 2.339 | 1.00 | |
| 8_L | 57_A | 2.213 | 1.00 | |
| 101_K | 105_D | 2.196 | 1.00 | |
| 89_A | 103_F | 2.048 | 1.00 | |
| 14_D | 70_K | 2.038 | 1.00 | |
| 71_Y | 82_F | 1.931 | 1.00 | |
| 22_G | 55_T | 1.924 | 1.00 | |
| 10_D | 66_G | 1.882 | 1.00 | |
| 39_I | 79_L | 1.85 | 1.00 | |
| 96_S | 99_Q | 1.848 | 1.00 | |
| 61_I | 76_I | 1.742 | 1.00 | |
| 23_A | 83_K | 1.707 | 1.00 | |
| 50_Y | 105_D | 1.704 | 1.00 | |
| 24_I | 55_T | 1.678 | 1.00 | |
| 80_L | 90_T | 1.655 | 1.00 | |
| 61_I | 68_A | 1.65 | 1.00 | |
| 80_L | 87_V | 1.648 | 1.00 | |
| 10_D | 67_T | 1.567 | 1.00 | |
| 97_K | 101_K | 1.546 | 1.00 | |
| 14_D | 19_K | 1.531 | 1.00 | |
| 12_S | 16_D | 1.521 | 1.00 | |
| 60_N | 63_Q | 1.447 | 1.00 | |
| 27_D | 58_K | 1.433 | 1.00 | |
| 42_I | 45_E | 1.433 | 1.00 | |
| 33_C | 36_C | 1.393 | 0.99 | |
| 50_Y | 101_K | 1.361 | 0.99 | |
| 42_I | 97_K | 1.355 | 0.99 | |
| 81_L | 107_N | 1.335 | 0.99 | |
| 99_Q | 102_E | 1.326 | 0.99 | |
| 9_T | 12_S | 1.318 | 0.99 | |
| 25_L | 43_L | 1.259 | 0.99 | |
| 49_E | 97_K | 1.258 | 0.99 | |
| 43_L | 56_V | 1.256 | 0.99 | |
| 103_F | 106_A | 1.25 | 0.99 | |
| 40_A | 58_K | 1.23 | 0.98 | |
| 10_D | 64_N | 1.196 | 0.98 | |
| 82_F | 87_V | 1.194 | 0.98 | |
| 81_L | 103_F | 1.19 | 0.98 | |
| 38_M | 94_A | 1.187 | 0.98 | |
| 28_F | 71_Y | 1.174 | 0.98 | |
| 25_L | 81_L | 1.167 | 0.97 | |
| 28_F | 73_I | 1.126 | 0.97 | |
| 95_L | 99_Q | 1.125 | 0.97 | |
| 31_E | 60_N | 1.108 | 0.96 | |
| 26_V | 82_F | 1.102 | 0.96 | |
| 8_L | 16_D | 1.099 | 0.96 | |
| 103_F | 107_N | 1.09 | 0.96 | |
| 15_T | 19_K | 1.083 | 0.96 | |
| 91_K | 95_L | 1.072 | 0.95 | |
| 98_G | 102_E | 1.071 | 0.95 | |
| 23_A | 81_L | 1.065 | 0.95 | |
| 89_A | 107_N | 1.036 | 0.94 | |
| 91_K | 103_F | 1.023 | 0.93 | |
| 16_D | 55_T | 1.017 | 0.93 | |
| 89_A | 106_A | 1.016 | 0.93 | |
| 4_K | 48_D | 1.009 | 0.93 | |
| 27_D | 39_I | 1.008 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3f8uA | 2 | 0.9725 | 99.9 | 0.118 | Contact Map | 0.804 |
| 2r2jA | 1 | 0.9908 | 99.8 | 0.127 | Contact Map | 0.82 |
| 1thxA | 1 | 1 | 99.8 | 0.129 | Contact Map | 0.845 |
| 4ekzA | 1 | 0.9908 | 99.8 | 0.135 | Contact Map | 0.752 |
| 3apoA | 1 | 0.9908 | 99.8 | 0.137 | Contact Map | 0.765 |
| 2b5eA | 1 | 0.9908 | 99.8 | 0.141 | Contact Map | 0.826 |
| 2o8vB | 1 | 1 | 99.8 | 0.149 | Contact Map | 0.843 |
| 2qsiA | 2 | 0.9817 | 99.8 | 0.149 | Contact Map | 0.764 |
| 2qgvA | 10 | 0.9908 | 99.8 | 0.149 | Contact Map | 0.743 |
| 3dxbA | 8 | 1 | 99.8 | 0.15 | Contact Map | 0.915 |
Sequence Conservation (Image Generated using WebLogo v3)