| UniProt: | P0A9N4 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10028 | ||
| Length: | 246 (241) | ||
| Sequences: | 2491 | ||
| Seq/Len: | 10.34 |
| PFLA
Paralog alert: 0.54 [within 20: 0.02] - ratio of genomes with paralogs Cluster includes: NRDG PFLA PFLC PFLE YJJW |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 61_V | 98_E | 3.462 | 1.00 | |
| 74_V | 95_C | 2.819 | 1.00 | |
| 234_K | 238_E | 2.734 | 1.00 | |
| 136_D | 146_S | 2.577 | 1.00 | |
| 94_A | 97_K | 2.521 | 1.00 | |
| 168_Y | 197_I | 2.477 | 1.00 | |
| 186_E | 240_Y | 2.444 | 1.00 | |
| 178_D | 232_R | 2.439 | 1.00 | |
| 54_E | 94_A | 2.432 | 1.00 | |
| 93_R | 123_V | 2.409 | 1.00 | |
| 76_A | 88_V | 2.409 | 1.00 | |
| 31_L | 107_N | 2.324 | 1.00 | |
| 76_A | 102_T | 2.308 | 1.00 | |
| 166_I | 188_T | 2.304 | 1.00 | |
| 136_D | 148_H | 2.264 | 1.00 | |
| 92_F | 102_T | 2.236 | 1.00 | |
| 96_K | 125_D | 2.223 | 1.00 | |
| 118_D | 156_Y | 2.171 | 1.00 | |
| 89_R | 119_E | 2.16 | 1.00 | |
| 156_Y | 159_N | 1.972 | 1.00 | |
| 139_H | 147_N | 1.965 | 1.00 | |
| 129_L | 154_A | 1.905 | 1.00 | |
| 148_H | 152_E | 1.883 | 1.00 | |
| 182_H | 239_Q | 1.87 | 1.00 | |
| 235_G | 239_Q | 1.846 | 1.00 | |
| 53_V | 94_A | 1.825 | 1.00 | |
| 182_H | 240_Y | 1.806 | 1.00 | |
| 181_A | 233_V | 1.792 | 1.00 | |
| 229_T | 232_R | 1.773 | 1.00 | |
| 101_H | 126_L | 1.742 | 1.00 | |
| 183_R | 186_E | 1.74 | 1.00 | |
| 131_L | 154_A | 1.718 | 1.00 | |
| 177_D | 180_S | 1.706 | 1.00 | |
| 182_H | 236_I | 1.701 | 1.00 | |
| 127_V | 157_L | 1.683 | 1.00 | |
| 108_G | 129_L | 1.68 | 1.00 | |
| 226_K | 229_T | 1.669 | 1.00 | |
| 94_A | 98_E | 1.663 | 1.00 | |
| 138_I | 141_N | 1.652 | 1.00 | |
| 138_I | 180_S | 1.638 | 1.00 | |
| 156_Y | 160_K | 1.602 | 1.00 | |
| 8_H | 42_T | 1.6 | 1.00 | |
| 178_D | 182_H | 1.561 | 1.00 | |
| 152_E | 155_K | 1.555 | 1.00 | |
| 76_A | 91_W | 1.534 | 1.00 | |
| 140_Q | 146_S | 1.521 | 1.00 | |
| 7_I | 27_F | 1.495 | 1.00 | |
| 173_G | 222_V | 1.485 | 1.00 | |
| 127_V | 162_V | 1.447 | 1.00 | |
| 188_T | 197_I | 1.431 | 1.00 | |
| 76_A | 92_F | 1.431 | 1.00 | |
| 60_V | 95_C | 1.43 | 1.00 | |
| 185_G | 236_I | 1.427 | 1.00 | |
| 52_T | 55_D | 1.398 | 0.99 | |
| 11_E | 14_G | 1.388 | 0.99 | |
| 142_L | 174_W | 1.377 | 0.99 | |
| 155_K | 159_N | 1.37 | 0.99 | |
| 27_F | 76_A | 1.359 | 0.99 | |
| 51_V | 56_L | 1.344 | 0.99 | |
| 106_T | 129_L | 1.341 | 0.99 | |
| 158_A | 192_G | 1.336 | 0.99 | |
| 54_E | 58_K | 1.332 | 0.99 | |
| 88_V | 104_L | 1.331 | 0.99 | |
| 178_D | 229_T | 1.321 | 0.99 | |
| 168_Y | 184_L | 1.319 | 0.99 | |
| 163_K | 195_E | 1.309 | 0.99 | |
| 128_M | 167_R | 1.304 | 0.99 | |
| 170_V | 233_V | 1.296 | 0.99 | |
| 59_E | 62_T | 1.261 | 0.99 | |
| 57_M | 94_A | 1.256 | 0.99 | |
| 81_A | 88_V | 1.25 | 0.99 | |
| 38_H | 105_D | 1.249 | 0.99 | |
| 185_G | 240_Y | 1.249 | 0.99 | |
| 154_A | 166_I | 1.244 | 0.98 | |
| 112_R | 152_E | 1.242 | 0.98 | |
| 25_T | 60_V | 1.229 | 0.98 | |
| 92_F | 124_T | 1.225 | 0.98 | |
| 32_M | 107_N | 1.198 | 0.98 | |
| 135_N | 180_S | 1.197 | 0.98 | |
| 134_M | 187_F | 1.196 | 0.98 | |
| 211_V | 220_D | 1.195 | 0.98 | |
| 185_G | 237_L | 1.19 | 0.98 | |
| 225_P | 230_M | 1.188 | 0.98 | |
| 22_R | 75_T | 1.184 | 0.98 | |
| 194_V | 243_K | 1.181 | 0.98 | |
| 174_W | 222_V | 1.18 | 0.98 | |
| 32_M | 109_F | 1.174 | 0.98 | |
| 89_R | 93_R | 1.167 | 0.97 | |
| 135_N | 183_R | 1.165 | 0.97 | |
| 111_R | 116_V | 1.157 | 0.97 | |
| 151_L | 187_F | 1.155 | 0.97 | |
| 96_K | 123_V | 1.154 | 0.97 | |
| 51_V | 55_D | 1.149 | 0.97 | |
| 227_K | 231_E | 1.147 | 0.97 | |
| 81_A | 104_L | 1.145 | 0.97 | |
| 6_R | 50_E | 1.138 | 0.97 | |
| 157_L | 164_V | 1.136 | 0.97 | |
| 52_T | 87_F | 1.129 | 0.97 | |
| 133_Q | 180_S | 1.121 | 0.97 | |
| 35_L | 141_N | 1.121 | 0.97 | |
| 93_R | 119_E | 1.114 | 0.96 | |
| 93_R | 97_K | 1.107 | 0.96 | |
| 36_Y | 171_V | 1.106 | 0.96 | |
| 179_D | 183_R | 1.101 | 0.96 | |
| 155_K | 187_F | 1.101 | 0.96 | |
| 118_D | 160_K | 1.098 | 0.96 | |
| 23_F | 59_E | 1.097 | 0.96 | |
| 31_L | 83_L | 1.092 | 0.96 | |
| 104_L | 127_V | 1.087 | 0.96 | |
| 133_Q | 143_V | 1.085 | 0.96 | |
| 108_G | 154_A | 1.079 | 0.95 | |
| 231_E | 235_G | 1.076 | 0.95 | |
| 89_R | 123_V | 1.062 | 0.95 | |
| 176_D | 229_T | 1.055 | 0.95 | |
| 216_E | 220_D | 1.047 | 0.94 | |
| 102_T | 124_T | 1.037 | 0.94 | |
| 231_E | 234_K | 1.037 | 0.94 | |
| 95_C | 100_I | 1.036 | 0.94 | |
| 147_N | 151_L | 1.029 | 0.94 | |
| 199_L | 237_L | 1.027 | 0.94 | |
| 154_A | 187_F | 1.023 | 0.93 | |
| 57_M | 95_C | 1.02 | 0.93 | |
| 53_V | 91_W | 1.019 | 0.93 | |
| 82_I | 110_V | 1.017 | 0.93 | |
| 117_I | 153_F | 1.013 | 0.93 | |
| 5_G | 87_F | 1.011 | 0.93 | |
| 55_D | 62_T | 1.011 | 0.93 | |
| 233_V | 236_I | 1.01 | 0.93 | |
| 96_K | 102_T | 1.007 | 0.93 | |
| 112_R | 156_Y | 1.004 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3c8fA | 1 | 0.9878 | 100 | 0.394 | Contact Map | 0.741 |
| 3canA | 1 | 0.7195 | 100 | 0.572 | Contact Map | 0.775 |
| 3rfaA | 2 | 0.9106 | 100 | 0.609 | Contact Map | 0.624 |
| 2yx0A | 1 | 0.9431 | 100 | 0.621 | Contact Map | 0.708 |
| 2z2uA | 1 | 0.9268 | 100 | 0.622 | Contact Map | 0.688 |
| 1tv8A | 2 | 0.8821 | 99.9 | 0.659 | Contact Map | 0.776 |
| 1oltA | 1 | 0.9675 | 99.9 | 0.675 | Contact Map | 0.504 |
| 2qgqA | 8 | 0.8659 | 99.9 | 0.694 | Contact Map | 0.724 |
| 1r30A | 2 | 0.9228 | 99.8 | 0.702 | Contact Map | 0.546 |
| 3t7vA | 1 | 0.9228 | 99.8 | 0.709 | Contact Map | 0.604 |
Sequence Conservation (Image Generated using WebLogo v3)