| UniProt: | P0A955 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10256 | ||
| Length: | 213 (202) | ||
| Sequences: | 1542 | ||
| Seq/Len: | 7.63 |
| ALKH
Paralog alert: 0.43 [within 20: 0.01] - ratio of genomes with paralogs Cluster includes: ALKH DGOA |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 61_A | 89_Q | 3.507 | 1.00 | |
| 196_D | 199_R | 2.797 | 1.00 | |
| 55_D | 58_R | 2.364 | 1.00 | |
| 202_K | 206_E | 2.323 | 1.00 | |
| 35_A | 39_G | 2.28 | 1.00 | |
| 97_T | 126_D | 2.207 | 1.00 | |
| 34_K | 63_E | 2.127 | 1.00 | |
| 201_T | 205_R | 2.117 | 1.00 | |
| 98_E | 123_L | 2.061 | 1.00 | |
| 33_A | 60_I | 1.984 | 1.00 | |
| 76_N | 79_Q | 1.978 | 1.00 | |
| 48_L | 54_V | 1.938 | 1.00 | |
| 84_T | 109_I | 1.924 | 1.00 | |
| 25_K | 28_H | 1.903 | 1.00 | |
| 101_L | 111_L | 1.902 | 1.00 | |
| 124_G | 132_F | 1.888 | 1.00 | |
| 170_R | 174_A | 1.878 | 1.00 | |
| 28_H | 195_G | 1.875 | 1.00 | |
| 38_A | 201_T | 1.86 | 1.00 | |
| 58_R | 62_K | 1.852 | 1.00 | |
| 54_V | 82_E | 1.834 | 1.00 | |
| 79_Q | 82_E | 1.825 | 1.00 | |
| 81_A | 85_E | 1.793 | 1.00 | |
| 81_A | 103_A | 1.783 | 1.00 | |
| 117_T | 120_E | 1.76 | 1.00 | |
| 18_V | 159_C | 1.751 | 1.00 | |
| 96_L | 127_Y | 1.741 | 1.00 | |
| 78_Q | 82_E | 1.695 | 1.00 | |
| 140_N | 145_A | 1.689 | 1.00 | |
| 115_I | 121_L | 1.668 | 1.00 | |
| 21_I | 44_L | 1.643 | 1.00 | |
| 57_I | 71_A | 1.616 | 1.00 | |
| 92_I | 112_I | 1.613 | 1.00 | |
| 102_K | 127_Y | 1.608 | 1.00 | |
| 125_M | 155_Q | 1.601 | 1.00 | |
| 199_R | 202_K | 1.593 | 1.00 | |
| 121_L | 156_V | 1.566 | 1.00 | |
| 105_T | 130_K | 1.559 | 1.00 | |
| 26_L | 52_C | 1.549 | 1.00 | |
| 125_M | 156_V | 1.531 | 1.00 | |
| 115_I | 132_F | 1.521 | 1.00 | |
| 145_A | 149_I | 1.511 | 0.99 | |
| 99_P | 126_D | 1.503 | 0.99 | |
| 46_V | 60_I | 1.481 | 0.99 | |
| 74_V | 91_A | 1.439 | 0.99 | |
| 134_F | 140_N | 1.407 | 0.99 | |
| 37_V | 64_V | 1.406 | 0.99 | |
| 103_A | 107_G | 1.404 | 0.99 | |
| 30_V | 59_A | 1.383 | 0.99 | |
| 55_D | 59_A | 1.381 | 0.99 | |
| 104_A | 111_L | 1.36 | 0.99 | |
| 182_G | 185_W | 1.357 | 0.99 | |
| 37_V | 67_A | 1.339 | 0.98 | |
| 96_L | 101_L | 1.339 | 0.98 | |
| 93_S | 111_L | 1.336 | 0.98 | |
| 81_A | 107_G | 1.33 | 0.98 | |
| 52_C | 55_D | 1.329 | 0.98 | |
| 30_V | 63_E | 1.327 | 0.98 | |
| 96_L | 115_I | 1.319 | 0.98 | |
| 191_A | 199_R | 1.302 | 0.98 | |
| 80_L | 100_L | 1.267 | 0.98 | |
| 118_V | 149_I | 1.263 | 0.98 | |
| 116_S | 140_N | 1.259 | 0.98 | |
| 121_L | 153_F | 1.241 | 0.97 | |
| 134_F | 158_F | 1.232 | 0.97 | |
| 48_L | 83_V | 1.207 | 0.97 | |
| 30_V | 64_V | 1.194 | 0.96 | |
| 34_K | 38_A | 1.19 | 0.96 | |
| 93_S | 113_P | 1.182 | 0.96 | |
| 70_G | 90_F | 1.182 | 0.96 | |
| 122_M | 153_F | 1.18 | 0.96 | |
| 95_G | 122_M | 1.165 | 0.96 | |
| 37_V | 42_R | 1.157 | 0.95 | |
| 160_P | 177_S | 1.154 | 0.95 | |
| 91_A | 104_A | 1.152 | 0.95 | |
| 91_A | 109_I | 1.149 | 0.95 | |
| 138_E | 144_K | 1.149 | 0.95 | |
| 146_L | 177_S | 1.145 | 0.95 | |
| 180_C | 185_W | 1.141 | 0.95 | |
| 119_S | 123_L | 1.14 | 0.95 | |
| 200_I | 204_A | 1.129 | 0.94 | |
| 199_R | 203_L | 1.11 | 0.94 | |
| 98_E | 102_K | 1.108 | 0.94 | |
| 165_S | 168_N | 1.101 | 0.93 | |
| 137_A | 164_I | 1.098 | 0.93 | |
| 59_A | 63_E | 1.089 | 0.93 | |
| 138_E | 172_Y | 1.074 | 0.92 | |
| 99_P | 102_K | 1.072 | 0.92 | |
| 34_K | 64_V | 1.068 | 0.92 | |
| 49_R | 161_T | 1.057 | 0.92 | |
| 80_L | 103_A | 1.055 | 0.91 | |
| 139_A | 145_A | 1.051 | 0.91 | |
| 83_V | 88_A | 1.047 | 0.91 | |
| 30_V | 60_I | 1.041 | 0.91 | |
| 80_L | 91_A | 1.036 | 0.90 | |
| 71_A | 83_V | 1.028 | 0.90 | |
| 106_E | 126_D | 1.022 | 0.90 | |
| 205_R | 209_E | 1.021 | 0.90 | |
| 160_P | 178_V | 1.019 | 0.89 | |
| 80_L | 104_A | 1.018 | 0.89 | |
| 26_L | 56_A | 1.007 | 0.89 | |
| 20_V | 161_T | 1.006 | 0.89 | |
| 116_S | 149_I | 1.005 | 0.89 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1vhcA | 6 | 1 | 100 | 0.46 | Contact Map | 0.803 |
| 1wbhA | 3 | 1 | 100 | 0.467 | Contact Map | 0.765 |
| 4e38A | 3 | 1 | 100 | 0.472 | Contact Map | 0.796 |
| 3labA | 2 | 0.9812 | 100 | 0.475 | Contact Map | 0.681 |
| 1mxsA | 1 | 1 | 100 | 0.481 | Contact Map | 0.688 |
| 2yw3A | 6 | 0.9531 | 100 | 0.501 | Contact Map | 0.702 |
| 1wa3A | 6 | 0.9437 | 100 | 0.552 | Contact Map | 0.82 |
| 2v82A | 1 | 0.939 | 100 | 0.603 | Contact Map | 0.643 |
| 1w8sA | 10 | 0.9624 | 99.9 | 0.655 | Contact Map | 0.371 |
| 3ajxA | 4 | 0.8779 | 99.9 | 0.684 | Contact Map | 0.524 |
Sequence Conservation (Image Generated using WebLogo v3)