| UniProt: | P0A8W2 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13408 | ||
| Length: | 144 (137) | ||
| Sequences: | 9327 | ||
| Seq/Len: | 68.08 |
| SLYA
Paralog alert: 0.89 [within 20: 0.13] - ratio of genomes with paralogs Cluster includes: MARR MPRA SLYA |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 122_E | 132_K | 2.886 | 1.00 | |
| 79_Q | 91_K | 2.882 | 1.00 | |
| 119_S | 122_E | 2.659 | 1.00 | |
| 46_D | 91_K | 2.65 | 1.00 | |
| 77_S | 91_K | 2.618 | 1.00 | |
| 81_C | 89_R | 2.318 | 1.00 | |
| 118_I | 129_L | 2.248 | 1.00 | |
| 125_Q | 129_L | 2.135 | 1.00 | |
| 48_S | 87_A | 2.024 | 1.00 | |
| 125_Q | 128_T | 1.938 | 1.00 | |
| 33_H | 73_K | 1.929 | 1.00 | |
| 49_Q | 67_L | 1.926 | 1.00 | |
| 41_H | 100_I | 1.91 | 1.00 | |
| 71_E | 78_R | 1.828 | 1.00 | |
| 117_G | 136_N | 1.813 | 1.00 | |
| 81_C | 87_A | 1.785 | 1.00 | |
| 80_T | 88_K | 1.753 | 1.00 | |
| 48_S | 51_Q | 1.751 | 1.00 | |
| 122_E | 128_T | 1.729 | 1.00 | |
| 68_D | 85_R | 1.706 | 1.00 | |
| 126_L | 129_L | 1.688 | 1.00 | |
| 95_K | 98_P | 1.615 | 1.00 | |
| 41_H | 92_L | 1.566 | 1.00 | |
| 95_K | 99_L | 1.531 | 1.00 | |
| 67_L | 90_I | 1.523 | 1.00 | |
| 74_G | 95_K | 1.508 | 1.00 | |
| 30_T | 33_H | 1.481 | 1.00 | |
| 44_P | 55_A | 1.444 | 1.00 | |
| 68_D | 72_E | 1.428 | 1.00 | |
| 122_E | 125_Q | 1.419 | 1.00 | |
| 129_L | 132_K | 1.414 | 1.00 | |
| 41_H | 97_E | 1.329 | 0.99 | |
| 8_D | 131_A | 1.329 | 0.99 | |
| 27_L | 106_V | 1.319 | 0.99 | |
| 49_Q | 88_K | 1.304 | 0.99 | |
| 98_P | 102_E | 1.294 | 0.99 | |
| 50_I | 60_Q | 1.279 | 0.99 | |
| 46_D | 89_R | 1.267 | 0.99 | |
| 49_Q | 90_I | 1.264 | 0.99 | |
| 36_T | 66_T | 1.255 | 0.99 | |
| 67_L | 76_I | 1.253 | 0.99 | |
| 36_T | 63_L | 1.235 | 0.98 | |
| 33_H | 69_Q | 1.23 | 0.98 | |
| 122_E | 129_L | 1.213 | 0.98 | |
| 58_I | 62_S | 1.198 | 0.98 | |
| 128_T | 132_K | 1.177 | 0.98 | |
| 59_E | 65_R | 1.176 | 0.98 | |
| 12_L | 130_I | 1.17 | 0.97 | |
| 99_L | 102_E | 1.163 | 0.97 | |
| 64_V | 68_D | 1.153 | 0.97 | |
| 78_R | 88_K | 1.148 | 0.97 | |
| 49_Q | 64_V | 1.145 | 0.97 | |
| 94_E | 97_E | 1.131 | 0.97 | |
| 45_P | 97_E | 1.12 | 0.96 | |
| 8_D | 127_I | 1.102 | 0.96 | |
| 23_R | 113_E | 1.102 | 0.96 | |
| 51_Q | 54_K | 1.097 | 0.96 | |
| 92_L | 96_A | 1.095 | 0.96 | |
| 73_K | 95_K | 1.081 | 0.95 | |
| 21_D | 31_Q | 1.062 | 0.95 | |
| 94_E | 98_P | 1.057 | 0.95 | |
| 27_L | 102_E | 1.055 | 0.95 | |
| 46_D | 79_Q | 1.048 | 0.94 | |
| 75_L | 99_L | 1.047 | 0.94 | |
| 28_E | 73_K | 1.043 | 0.94 | |
| 59_E | 62_S | 1.041 | 0.94 | |
| 12_L | 134_E | 1.041 | 0.94 | |
| 32_T | 66_T | 1.034 | 0.94 | |
| 23_R | 106_V | 1.029 | 0.94 | |
| 13_V | 17_R | 1.015 | 0.93 | |
| 10_A | 13_V | 1.011 | 0.93 | |
| 68_D | 71_E | 1.007 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3deuA | 2 | 1 | 99.9 | 0.191 | Contact Map | 0.654 |
| 4aikA | 2 | 1 | 99.9 | 0.213 | Contact Map | 0.728 |
| 3cjnA | 1 | 0.9792 | 99.9 | 0.214 | Contact Map | 0.612 |
| 3e6mA | 8 | 0.9653 | 99.9 | 0.216 | Contact Map | 0.886 |
| 3zmdA | 4 | 0.9931 | 99.9 | 0.22 | Contact Map | 0.802 |
| 3k0lA | 2 | 0.9931 | 99.9 | 0.225 | Contact Map | 0.706 |
| 4em2A | 1 | 0.9931 | 99.9 | 0.226 | Contact Map | 0.575 |
| 2fa5A | 2 | 0.9931 | 99.9 | 0.228 | Contact Map | 0.758 |
| 3cdhA | 2 | 0.9931 | 99.9 | 0.228 | Contact Map | 0.681 |
| 3s2wA | 8 | 0.9722 | 99.9 | 0.228 | Contact Map | 0.841 |
Sequence Conservation (Image Generated using WebLogo v3)