| UniProt: | P0A8A2 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13382 | ||
| Length: | 238 (235) | ||
| Sequences: | 1613 | ||
| Seq/Len: | 6.86 |
| YEEN
Paralog alert: 0.23 [within 20: 0.00] - ratio of genomes with paralogs Cluster includes: YEBC YEEN |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 132_D | 202_Q | 4.001 | 1.00 | |
| 109_N | 225_D | 3.838 | 1.00 | |
| 65_D | 69_D | 3.794 | 1.00 | |
| 11_K | 15_K | 3.567 | 1.00 | |
| 96_A | 114_F | 3.317 | 1.00 | |
| 208_S | 211_D | 3.126 | 1.00 | |
| 41_P | 51_I | 2.98 | 1.00 | |
| 143_D | 146_H | 2.949 | 1.00 | |
| 39_P | 72_K | 2.761 | 1.00 | |
| 122_G | 126_S | 2.663 | 1.00 | |
| 182_A | 186_A | 2.46 | 1.00 | |
| 14_A | 18_A | 2.402 | 1.00 | |
| 206_E | 236_A | 2.31 | 1.00 | |
| 6_A | 9_V | 2.151 | 1.00 | |
| 176_D | 179_K | 2.092 | 1.00 | |
| 86_G | 114_F | 2.065 | 1.00 | |
| 135_G | 172_T | 2.042 | 1.00 | |
| 9_V | 13_T | 2.022 | 1.00 | |
| 151_L | 156_V | 1.941 | 1.00 | |
| 146_H | 149_E | 1.94 | 1.00 | |
| 63_V | 66_K | 1.933 | 1.00 | |
| 173_E | 176_D | 1.858 | 1.00 | |
| 117_K | 221_A | 1.822 | 1.00 | |
| 98_T | 106_T | 1.816 | 1.00 | |
| 177_L | 195_T | 1.788 | 1.00 | |
| 113_I | 225_D | 1.777 | 1.00 | |
| 29_E | 46_S | 1.767 | 1.00 | |
| 149_E | 153_E | 1.763 | 1.00 | |
| 172_T | 180_G | 1.754 | 1.00 | |
| 94_I | 218_L | 1.753 | 1.00 | |
| 207_L | 215_F | 1.734 | 1.00 | |
| 5_W | 9_V | 1.726 | 1.00 | |
| 204_E | 236_A | 1.674 | 1.00 | |
| 26_F | 57_A | 1.662 | 1.00 | |
| 219_V | 233_H | 1.634 | 1.00 | |
| 67_A | 71_A | 1.618 | 1.00 | |
| 80_V | 103_V | 1.617 | 1.00 | |
| 94_I | 114_F | 1.595 | 1.00 | |
| 83_R | 95_I | 1.586 | 1.00 | |
| 61_K | 65_D | 1.584 | 1.00 | |
| 87_F | 93_M | 1.551 | 0.99 | |
| 7_N | 11_K | 1.54 | 0.99 | |
| 144_P | 163_E | 1.497 | 0.99 | |
| 51_I | 55_K | 1.474 | 0.99 | |
| 6_A | 10_A | 1.457 | 0.99 | |
| 150_I | 189_I | 1.447 | 0.99 | |
| 174_P | 197_L | 1.432 | 0.99 | |
| 219_V | 223_E | 1.43 | 0.99 | |
| 137_I | 172_T | 1.427 | 0.99 | |
| 12_K | 16_D | 1.421 | 0.99 | |
| 211_D | 214_I | 1.416 | 0.99 | |
| 22_I | 57_A | 1.413 | 0.99 | |
| 7_N | 15_K | 1.41 | 0.99 | |
| 139_F | 170_I | 1.397 | 0.99 | |
| 97_E | 230_K | 1.39 | 0.99 | |
| 162_T | 171_Y | 1.383 | 0.99 | |
| 181_I | 185_K | 1.377 | 0.98 | |
| 137_I | 177_L | 1.373 | 0.98 | |
| 201_A | 204_E | 1.365 | 0.98 | |
| 49_F | 53_R | 1.365 | 0.98 | |
| 178_H | 182_A | 1.357 | 0.98 | |
| 88_G | 215_F | 1.345 | 0.98 | |
| 51_I | 68_I | 1.335 | 0.98 | |
| 1_M | 7_N | 1.321 | 0.98 | |
| 136_V | 198_E | 1.31 | 0.98 | |
| 121_I | 124_A | 1.305 | 0.98 | |
| 147_I | 168_I | 1.303 | 0.98 | |
| 1_M | 4_K | 1.3 | 0.98 | |
| 34_A | 72_K | 1.293 | 0.97 | |
| 60_P | 63_V | 1.293 | 0.97 | |
| 112_T | 115_N | 1.292 | 0.97 | |
| 151_L | 161_V | 1.277 | 0.97 | |
| 23_Y | 59_V | 1.254 | 0.97 | |
| 55_K | 60_P | 1.248 | 0.97 | |
| 69_D | 74_G | 1.245 | 0.97 | |
| 136_V | 169_V | 1.232 | 0.96 | |
| 90_N | 211_D | 1.226 | 0.96 | |
| 207_L | 211_D | 1.223 | 0.96 | |
| 144_P | 148_F | 1.219 | 0.96 | |
| 83_R | 97_E | 1.217 | 0.96 | |
| 183_A | 186_A | 1.208 | 0.96 | |
| 4_K | 7_N | 1.204 | 0.96 | |
| 117_K | 217_G | 1.197 | 0.96 | |
| 136_V | 200_I | 1.169 | 0.95 | |
| 55_K | 61_K | 1.16 | 0.94 | |
| 51_I | 64_I | 1.154 | 0.94 | |
| 59_V | 63_V | 1.147 | 0.94 | |
| 82_G | 98_T | 1.14 | 0.94 | |
| 154_A | 183_A | 1.126 | 0.93 | |
| 113_I | 221_A | 1.115 | 0.93 | |
| 8_I | 12_K | 1.114 | 0.93 | |
| 40_D | 43_L | 1.112 | 0.93 | |
| 32_A | 99_L | 1.11 | 0.93 | |
| 210_E | 213_E | 1.101 | 0.92 | |
| 130_M | 202_Q | 1.091 | 0.92 | |
| 110_V | 225_D | 1.087 | 0.91 | |
| 7_N | 10_A | 1.086 | 0.91 | |
| 108_A | 112_T | 1.08 | 0.91 | |
| 83_R | 199_M | 1.077 | 0.91 | |
| 182_A | 185_K | 1.077 | 0.91 | |
| 62_H | 66_K | 1.075 | 0.91 | |
| 112_T | 116_K | 1.07 | 0.91 | |
| 9_V | 15_K | 1.068 | 0.91 | |
| 28_V | 36_Q | 1.066 | 0.90 | |
| 154_A | 180_G | 1.061 | 0.90 | |
| 148_F | 152_L | 1.06 | 0.90 | |
| 92_S | 215_F | 1.059 | 0.90 | |
| 112_T | 117_K | 1.046 | 0.89 | |
| 215_F | 235_V | 1.042 | 0.89 | |
| 94_I | 215_F | 1.042 | 0.89 | |
| 82_G | 100_T | 1.039 | 0.89 | |
| 82_G | 103_V | 1.039 | 0.89 | |
| 205_V | 234_N | 1.032 | 0.88 | |
| 150_I | 187_A | 1.031 | 0.88 | |
| 88_G | 94_I | 1.026 | 0.88 | |
| 209_P | 213_E | 1.026 | 0.88 | |
| 140_K | 193_S | 1.025 | 0.88 | |
| 130_M | 203_S | 1.02 | 0.88 | |
| 134_T | 201_A | 1.019 | 0.88 | |
| 13_T | 19_T | 1.002 | 0.86 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1lfpA | 1 | 0.9874 | 100 | -0.028 | Contact Map | 0.736 |
| 1konA | 1 | 0.9874 | 100 | -0.023 | Contact Map | 0.7 |
| 4f3qA | 1 | 0.9874 | 100 | -0.021 | Contact Map | 0.697 |
| 1mw7A | 1 | 0.9748 | 100 | -0.017 | Contact Map | 0.742 |
| 2lqjA | 1 | 0.3361 | 40.6 | 0.958 | Contact Map | 0.475 |
| 2jsxA | 1 | 0.3109 | 25.2 | 0.962 | Contact Map | 0.474 |
| 2ko1A | 2 | 0.3151 | 24.8 | 0.962 | Contact Map | 0.462 |
| 1y7pA | 3 | 0.3151 | 17.7 | 0.964 | Contact Map | 0.611 |
| 3l7pA | 6 | 0.3193 | 14.4 | 0.966 | Contact Map | 0.712 |
| 4affA | 1 | 0.3739 | 14.1 | 0.966 | Contact Map | 0.506 |
Sequence Conservation (Image Generated using WebLogo v3)