| UniProt: | P0A8A0 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11137 | ||
| Length: | 246 (246) | ||
| Sequences: | 1624 | ||
| Seq/Len: | 6.60 |
| YEBC
Paralog alert: 0.23 [within 20: 0.00] - ratio of genomes with paralogs Cluster includes: YEBC YEEN |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 135_S | 203_S | 3.877 | 1.00 | |
| 112_E | 226_C | 3.695 | 1.00 | |
| 67_N | 71_A | 3.592 | 1.00 | |
| 13_R | 17_Q | 3.407 | 1.00 | |
| 99_I | 117_F | 3.299 | 1.00 | |
| 209_D | 212_T | 2.996 | 1.00 | |
| 43_P | 53_V | 2.873 | 1.00 | |
| 41_G | 74_V | 2.661 | 1.00 | |
| 125_G | 129_S | 2.456 | 1.00 | |
| 184_D | 188_A | 2.39 | 1.00 | |
| 16_A | 20_K | 2.289 | 1.00 | |
| 207_D | 237_E | 2.248 | 1.00 | |
| 178_E | 181_K | 2.138 | 1.00 | |
| 2_A | 9_N | 2.043 | 1.00 | |
| 89_G | 117_F | 2.042 | 1.00 | |
| 8_A | 11_R | 2.04 | 1.00 | |
| 138_G | 174_T | 2.003 | 1.00 | |
| 5_S | 8_A | 1.99 | 1.00 | |
| 65_T | 68_R | 1.959 | 1.00 | |
| 11_R | 15_A | 1.939 | 1.00 | |
| 149_T | 152_E | 1.896 | 1.00 | |
| 154_A | 159_A | 1.894 | 1.00 | |
| 5_S | 9_N | 1.891 | 1.00 | |
| 210_A | 245_T | 1.87 | 1.00 | |
| 120_C | 222_M | 1.85 | 1.00 | |
| 101_C | 109_T | 1.775 | 1.00 | |
| 97_I | 219_L | 1.763 | 1.00 | |
| 31_E | 48_R | 1.745 | 1.00 | |
| 116_A | 226_C | 1.745 | 1.00 | |
| 179_M | 196_A | 1.742 | 1.00 | |
| 174_T | 182_V | 1.722 | 1.00 | |
| 175_A | 178_E | 1.678 | 1.00 | |
| 160_E | 178_E | 1.673 | 1.00 | |
| 71_A | 76_G | 1.651 | 1.00 | |
| 83_E | 106_R | 1.638 | 1.00 | |
| 208_M | 216_L | 1.636 | 1.00 | |
| 152_E | 156_E | 1.635 | 1.00 | |
| 205_K | 237_E | 1.606 | 1.00 | |
| 97_I | 117_F | 1.588 | 1.00 | |
| 63_R | 67_N | 1.581 | 1.00 | |
| 163_V | 173_Y | 1.576 | 1.00 | |
| 28_I | 59_N | 1.558 | 0.99 | |
| 90_Y | 96_A | 1.532 | 0.99 | |
| 69_A | 73_G | 1.524 | 0.99 | |
| 220_I | 234_H | 1.508 | 0.99 | |
| 153_A | 191_L | 1.503 | 0.99 | |
| 7_W | 11_R | 1.489 | 0.99 | |
| 147_E | 164_T | 1.461 | 0.99 | |
| 53_V | 57_L | 1.459 | 0.99 | |
| 86_I | 98_M | 1.455 | 0.99 | |
| 9_N | 13_R | 1.394 | 0.99 | |
| 212_T | 215_K | 1.393 | 0.99 | |
| 2_A | 5_S | 1.393 | 0.99 | |
| 115_H | 118_S | 1.388 | 0.98 | |
| 51_A | 55_K | 1.387 | 0.98 | |
| 142_F | 172_V | 1.381 | 0.98 | |
| 143_E | 194_D | 1.376 | 0.98 | |
| 91_G | 216_L | 1.374 | 0.98 | |
| 140_I | 174_T | 1.371 | 0.98 | |
| 14_K | 18_D | 1.368 | 0.98 | |
| 220_I | 224_E | 1.367 | 0.98 | |
| 176_W | 198_V | 1.351 | 0.98 | |
| 100_E | 231_E | 1.334 | 0.98 | |
| 8_A | 12_H | 1.333 | 0.98 | |
| 24_I | 59_N | 1.328 | 0.98 | |
| 202_P | 205_K | 1.325 | 0.98 | |
| 154_A | 162_V | 1.315 | 0.98 | |
| 183_R | 187_E | 1.314 | 0.98 | |
| 150_I | 170_I | 1.294 | 0.97 | |
| 53_V | 70_I | 1.294 | 0.97 | |
| 9_N | 17_Q | 1.292 | 0.97 | |
| 140_I | 179_M | 1.288 | 0.97 | |
| 36_A | 74_V | 1.277 | 0.97 | |
| 25_F | 61_M | 1.255 | 0.97 | |
| 57_L | 62_T | 1.248 | 0.96 | |
| 180_G | 184_D | 1.247 | 0.96 | |
| 62_T | 65_T | 1.244 | 0.96 | |
| 2_A | 8_A | 1.241 | 0.96 | |
| 139_V | 199_S | 1.236 | 0.96 | |
| 61_M | 65_T | 1.216 | 0.96 | |
| 86_I | 100_E | 1.201 | 0.95 | |
| 93_G | 212_T | 1.2 | 0.95 | |
| 57_L | 63_R | 1.186 | 0.95 | |
| 85_I | 101_C | 1.186 | 0.95 | |
| 185_A | 188_A | 1.182 | 0.95 | |
| 77_D | 80_A | 1.175 | 0.95 | |
| 160_E | 175_A | 1.171 | 0.94 | |
| 139_V | 171_D | 1.169 | 0.94 | |
| 124_L | 127_D | 1.169 | 0.94 | |
| 147_E | 151_M | 1.164 | 0.94 | |
| 208_M | 212_T | 1.152 | 0.94 | |
| 120_C | 218_R | 1.147 | 0.94 | |
| 30_R | 38_L | 1.144 | 0.93 | |
| 238_I | 243_A | 1.14 | 0.93 | |
| 153_A | 189_A | 1.14 | 0.93 | |
| 34_T | 102_L | 1.139 | 0.93 | |
| 4_H | 7_W | 1.122 | 0.93 | |
| 207_D | 239_S | 1.122 | 0.93 | |
| 42_D | 45_A | 1.121 | 0.93 | |
| 115_H | 119_K | 1.109 | 0.92 | |
| 157_A | 185_A | 1.102 | 0.92 | |
| 139_V | 201_I | 1.101 | 0.92 | |
| 144_K | 168_G | 1.092 | 0.91 | |
| 11_R | 17_Q | 1.088 | 0.91 | |
| 115_H | 120_C | 1.084 | 0.91 | |
| 111_A | 115_H | 1.082 | 0.91 | |
| 10_T | 14_K | 1.079 | 0.91 | |
| 133_L | 203_S | 1.079 | 0.91 | |
| 211_E | 214_P | 1.076 | 0.90 | |
| 64_D | 68_R | 1.07 | 0.90 | |
| 210_A | 242_V | 1.063 | 0.90 | |
| 6_K | 11_R | 1.063 | 0.90 | |
| 116_A | 222_M | 1.061 | 0.90 | |
| 151_M | 155_L | 1.055 | 0.89 | |
| 184_D | 187_E | 1.054 | 0.89 | |
| 162_V | 172_V | 1.054 | 0.89 | |
| 86_I | 200_M | 1.051 | 0.89 | |
| 53_V | 66_L | 1.047 | 0.89 | |
| 157_A | 182_V | 1.029 | 0.88 | |
| 133_L | 204_T | 1.022 | 0.87 | |
| 137_K | 202_P | 1.018 | 0.87 | |
| 216_L | 236_G | 1.015 | 0.87 | |
| 97_I | 216_L | 1.011 | 0.86 | |
| 219_L | 223_L | 1.009 | 0.86 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1konA | 1 | 1 | 100 | -0.027 | Contact Map | 0.681 |
| 1lfpA | 1 | 0.9959 | 100 | -0.024 | Contact Map | 0.7 |
| 4f3qA | 1 | 0.9878 | 100 | -0.017 | Contact Map | 0.684 |
| 1mw7A | 1 | 0.9431 | 100 | 0.051 | Contact Map | 0.731 |
| 2lqjA | 1 | 0.3333 | 45.9 | 0.959 | Contact Map | 0.454 |
| 2lvwA | 2 | 0.3496 | 26.8 | 0.964 | Contact Map | 0.495 |
| 2jsxA | 1 | 0.3333 | 24.9 | 0.964 | Contact Map | 0.485 |
| 3l7pA | 6 | 0.3171 | 18.4 | 0.966 | Contact Map | 0.653 |
| 1zl0A | 2 | 0.374 | 17.3 | 0.967 | Contact Map | 0.487 |
| 4eysA | 1 | 0.3293 | 16.9 | 0.967 | Contact Map | 0.483 |
Sequence Conservation (Image Generated using WebLogo v3)