| UniProt: | P0A7N1 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG14326 | ||
| Length: | 87 (80) | ||
| Sequences: | 1215 | ||
| Seq/Len: | 15.19 |
| RL31B
Paralog alert: 0.33 [within 20: 0.00] - ratio of genomes with paralogs Cluster includes: RL31B RL31 |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 11_T | 24_K | 4.34 | 1.00 | |
| 36_E | 41_T | 2.912 | 1.00 | |
| 14_F | 23_F | 2.269 | 1.00 | |
| 13_V | 35_I | 2.26 | 1.00 | |
| 13_V | 24_K | 2.155 | 1.00 | |
| 15_H | 22_Y | 2.098 | 1.00 | |
| 37_L | 40_V | 2.018 | 1.00 | |
| 21_E | 52_K | 1.991 | 1.00 | |
| 10_R | 30_K | 1.827 | 1.00 | |
| 2_K | 6_H | 1.813 | 1.00 | |
| 11_T | 26_G | 1.762 | 1.00 | |
| 13_V | 22_Y | 1.755 | 1.00 | |
| 50_S | 53_S | 1.73 | 1.00 | |
| 9_Y | 26_G | 1.659 | 1.00 | |
| 19_V | 50_S | 1.642 | 1.00 | |
| 15_H | 46_T | 1.534 | 1.00 | |
| 71_A | 75_Q | 1.526 | 1.00 | |
| 31_T | 45_V | 1.464 | 1.00 | |
| 63_T | 66_S | 1.406 | 0.99 | |
| 4_N | 8_E | 1.309 | 0.99 | |
| 13_V | 44_Y | 1.301 | 0.99 | |
| 63_T | 70_V | 1.299 | 0.99 | |
| 75_Q | 78_G | 1.269 | 0.99 | |
| 29_I | 45_V | 1.262 | 0.99 | |
| 19_V | 52_K | 1.244 | 0.98 | |
| 19_V | 53_S | 1.242 | 0.98 | |
| 24_K | 37_L | 1.233 | 0.98 | |
| 12_V | 27_S | 1.186 | 0.98 | |
| 49_V | 68_G | 1.118 | 0.96 | |
| 60_K | 63_T | 1.115 | 0.96 | |
| 33_R | 46_T | 1.111 | 0.96 | |
| 15_H | 20_D | 1.109 | 0.96 | |
| 74_T | 78_G | 1.082 | 0.96 | |
| 69_N | 76_R | 1.07 | 0.95 | |
| 67_E | 71_A | 1.065 | 0.95 | |
| 33_R | 62_R | 1.06 | 0.95 | |
| 35_I | 41_T | 1.049 | 0.94 | |
| 63_T | 76_R | 1.002 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1vs6Z | 1 | 0.8046 | 100 | 0.224 | Contact Map | 0.173 |
| 3f1f4 | 1 | 0.8161 | 100 | 0.226 | Contact Map | 0.844 |
| 3v2d4 | 1 | 0.8161 | 100 | 0.226 | Contact Map | 0.766 |
| 1nkwY | 1 | 0.8391 | 100 | 0.228 | Contact Map | 0.025 |
| 3bbo1 | 1 | 0.8506 | 100 | 0.25 | Contact Map | 0 |
| 3cb4D | 6 | 0.7011 | 45.2 | 0.904 | Contact Map | 0 |
| 2yweA | 1 | 0.7011 | 39.4 | 0.908 | Contact Map | 0 |
| 3zmsC | 1 | 0.5632 | 15.9 | 0.924 | Contact Map | |
| 3j3bW | 1 | 0.4943 | 14.6 | 0.925 | Contact Map | 0.291 |
| 3j39W | 1 | 0.4943 | 14.6 | 0.925 | Contact Map | 0.182 |
Sequence Conservation (Image Generated using WebLogo v3)