| UniProt: | P0A7M9 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10889 | ||
| Length: | 70 (67) | ||
| Sequences: | 1382 | ||
| Seq/Len: | 20.63 |
| RL31
Paralog alert: 0.30 [within 20: 0.00] - ratio of genomes with paralogs Cluster includes: RL31B RL31 |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 11_E | 23_K | 4.326 | 1.00 | |
| 18_C | 37_C | 2.364 | 1.00 | |
| 9_Y | 25_R | 2.15 | 1.00 | |
| 13_T | 23_K | 2.129 | 1.00 | |
| 37_C | 40_C | 2.114 | 1.00 | |
| 14_A | 22_M | 2.102 | 1.00 | |
| 11_E | 25_R | 2.004 | 1.00 | |
| 2_K | 6_H | 1.935 | 1.00 | |
| 15_S | 21_V | 1.908 | 1.00 | |
| 20_N | 39_K | 1.897 | 1.00 | |
| 15_S | 33_N | 1.679 | 1.00 | |
| 13_T | 21_V | 1.672 | 1.00 | |
| 18_C | 40_C | 1.655 | 1.00 | |
| 50_D | 57_V | 1.516 | 1.00 | |
| 16_C | 37_C | 1.466 | 1.00 | |
| 16_C | 30_H | 1.46 | 1.00 | |
| 28_V | 32_L | 1.432 | 1.00 | |
| 16_C | 40_C | 1.425 | 1.00 | |
| 10_E | 29_G | 1.413 | 1.00 | |
| 58_D | 62_K | 1.384 | 0.99 | |
| 13_T | 31_D | 1.315 | 0.99 | |
| 18_C | 39_K | 1.292 | 0.99 | |
| 50_D | 53_T | 1.276 | 0.99 | |
| 62_K | 65_N | 1.22 | 0.98 | |
| 15_S | 31_D | 1.188 | 0.98 | |
| 47_K | 50_D | 1.135 | 0.97 | |
| 61_N | 66_I | 1.126 | 0.97 | |
| 4_D | 8_K | 1.114 | 0.96 | |
| 17_S | 33_N | 1.094 | 0.96 | |
| 56_R | 63_R | 1.053 | 0.95 | |
| 54_G | 58_D | 1.046 | 0.94 | |
| 20_N | 37_C | 1.036 | 0.94 | |
| 61_N | 65_N | 1.004 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1vs6Z | 1 | 1 | 100 | 0.021 | Contact Map | 0.117 |
| 3f1f4 | 1 | 0.9857 | 100 | 0.025 | Contact Map | 0.78 |
| 3v2d4 | 1 | 0.9857 | 100 | 0.034 | Contact Map | 0.802 |
| 1nkwY | 1 | 0.9857 | 100 | 0.034 | Contact Map | 0.022 |
| 3bbo1 | 1 | 0.9857 | 100 | 0.095 | Contact Map | 0 |
| 2ketA | 1 | 0.2286 | 28.9 | 0.891 | Contact Map | 0.439 |
| 3j39W | 1 | 0.5571 | 21.8 | 0.897 | Contact Map | 0.271 |
| 3j3bW | 1 | 0.5571 | 21.7 | 0.897 | Contact Map | 0.374 |
| 3izcZ | 1 | 0.5571 | 17.9 | 0.901 | Contact Map | 0.276 |
| 3cb4D | 6 | 0.8143 | 13.7 | 0.906 | Contact Map | 0 |
Sequence Conservation (Image Generated using WebLogo v3)