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OPENSEQ.org

YKGE - YKGG
UniProt: P77252 - P77433
Length: 470
Sequences: 566
Seq/Len: 1.33
I_Prob: 0.00

YKGE - Uncharacterized protein YkgE
Paralog alert: 0.65 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: GLCF GLPC YKGE
YKGG - Uncharacterized protein YkgG
Paralog alert: 0.82 [within 20: 0.55] - ratio of genomes with paralogs
Cluster includes: YKGG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
99_S 131_V 1.07 0.00
131_R 137_G 1.06 0.00
115_I 176_V 1.03 0.00
64_A 76_R 1.00 0.00
22_S 94_L 1.00 0.00
18_M 128_K 0.98 0.00
139_S 184_H 0.94 0.00
99_S 138_L 0.94 0.00
235_V 71_A 0.94 0.00
81_T 78_C 0.91 0.00
56_I 74_A 0.90 0.00
85_K 129_V 0.87 0.00
232_I 148_S 0.87 0.00
211_S 223_A 0.87 0.00
151_L 130_G 0.87 0.00
225_Q 226_L 0.86 0.00
216_I 171_T 0.86 0.00
191_K 77_L 0.84 0.00
65_A 57_V 0.84 0.00
198_M 104_Q 0.84 0.00
216_I 154_R 0.83 0.00
18_M 172_I 0.82 0.00
111_L 55_S 0.81 0.00
24_L 146_L 0.81 0.00
223_E 138_L 0.80 0.00
184_E 68_A 0.80 0.00
73_I 101_E 0.80 0.00
30_G 226_L 0.79 0.00
106_A 68_A 0.79 0.00
163_L 61_R 0.79 0.00
106_A 99_I 0.77 0.00
23_V 73_A 0.77 0.00
161_E 228_I 0.77 0.00
57_P 85_S 0.77 0.00
57_P 80_E 0.77 0.00
108_M 172_I 0.76 0.00
56_I 53_F 0.76 0.00
111_L 163_S 0.75 0.00
145_G 221_V 0.75 0.00
46_A 130_G 0.74 0.00
158_R 79_K 0.73 0.00
86_S 144_V 0.73 0.00
227_V 72_E 0.73 0.00
103_K 72_E 0.73 0.00
184_E 130_G 0.73 0.00
92_A 79_K 0.72 0.00
197_L 222_K 0.72 0.00
85_K 79_K 0.72 0.00
150_P 159_L 0.71 0.00
18_M 44_Q 0.71 0.00
11_G 45_Q 0.71 0.00
65_A 83_D 0.71 0.00
122_V 57_V 0.70 0.00
179_S 85_S 0.70 0.00
19_A 104_Q 0.70 0.00
77_A 47_C 0.70 0.00
229_V 87_V 0.70 0.00
73_I 147_F 0.70 0.00
102_A 172_I 0.70 0.00
81_T 143_G 0.70 0.00
155_K 72_E 0.70 0.00
32_R 61_R 0.69 0.00
33_V 148_S 0.69 0.00
101_A 98_G 0.69 0.00
148_D 52_Q 0.69 0.00
181_K 220_P 0.69 0.00
25_L 126_Q 0.69 0.00
169_D 181_E 0.68 0.00
158_R 52_Q 0.68 0.00
201_R 74_A 0.68 0.00
20_R 166_I 0.68 0.00
198_M 164_L 0.68 0.00
93_D 206_T 0.68 0.00
140_L 153_G 0.68 0.00
60_K 141_S 0.68 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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