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OPENSEQ.org
ATOA - ATOD
UniProt: P76459 - P76458
Length: 436
Sequences: 907
Seq/Len: 2.12
I_Prob: 0.98
ATOA - Acetate CoA-transferase subunit beta
Paralog alert: 0.43 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: ATOA 		ATOD - Acetate CoA-transferase subunit alpha
Paralog alert: 0.43 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: ATOD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1poiAC:BD:BDContact Map
3rrlAC:BD:BD:ACContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
86_A 112_A 2.13 0.98
78_M 169_L 2.06 0.97
92_H 211_D 1.79 0.93
80_D 177_L 1.75 0.92
82_A 177_L 1.51 0.83
49_F 170_S 1.34 0.71
83_M 209_V 1.29 0.67
86_A 209_V 1.04 0.40
52_L 170_S 1.01 0.35
83_M 180_L 1.00 0.35
72_V 169_L 0.96 0.31
161_Q 140_T 0.96 0.31
87_L 209_V 0.92 0.27
151_L 68_G 0.92 0.27
40_H 162_L 0.91 0.25
35_L 147_L 0.90 0.24
42_T 159_C 0.88 0.23
20_I 208_A 0.87 0.22
72_V 170_S 0.86 0.21
86_A 199_Q 0.86 0.21
92_H 209_V 0.84 0.19
93_I 208_A 0.82 0.18
62_L 169_L 0.81 0.17
67_G 53_D 0.81 0.17
155_T 68_G 0.79 0.16
196_R 16_R 0.77 0.14
80_D 110_G 0.77 0.14
80_D 21_I 0.77 0.14
144_K 192_L 0.77 0.14
105_E 45_R 0.76 0.14
7_I 178_I 0.76 0.14
122_M 78_I 0.76 0.13
113_V 126_V 0.75 0.13
42_T 162_L 0.75 0.13
130_T 115_G 0.75 0.13
54_P 18_G 0.75 0.13
93_I 95_V 0.75 0.13
134_K 154_I 0.74 0.12
38_G 110_G 0.74 0.12
86_A 155_R 0.74 0.12
127_D 119_T 0.74 0.12
145_D 213_I 0.73 0.12
92_H 120_P 0.72 0.11
13_Q 139_K 0.72 0.11
102_Q 140_T 0.72 0.11
120_P 80_T 0.70 0.10
167_L 211_D 0.70 0.10
94_D 181_A 0.70 0.10
4_K 169_L 0.69 0.10
15_L 110_G 0.69 0.10
34_Y 202_H 0.69 0.10
192_L 142_L 0.69 0.10
145_D 191_E 0.69 0.10
61_D 168_Q 0.69 0.10
197_A 183_D 0.68 0.09
5_Q 37_E 0.68 0.09
143_A 9_Q 0.68 0.09
40_H 202_H 0.67 0.09
144_K 158_R 0.67 0.09
130_T 121_T 0.66 0.08
193_A 197_E 0.66 0.08
127_D 121_T 0.66 0.08
93_I 49_L 0.66 0.08
182_W 46_D 0.65 0.08
196_R 71_R 0.65 0.08
173_V 207_G 0.65 0.07
172_A 11_A 0.64 0.07
34_Y 186_L 0.64 0.07
188_D 127_V 0.64 0.07
102_Q 215_V 0.63 0.07
7_I 120_P 0.63 0.07
133_R 153_L 0.63 0.07
67_G 134_L 0.63 0.07
144_K 146_P 0.63 0.07
145_D 8_L 0.63 0.07
145_D 177_L 0.63 0.07
87_L 208_A 0.63 0.07
4_K 64_L 0.63 0.07
70_C 214_I 0.62 0.07
67_G 77_H 0.62 0.07
47_N 173_N 0.62 0.07
153_R 158_R 0.62 0.06
115_P 175_N 0.62 0.06
134_K 68_G 0.62 0.06
174_F 45_R 0.62 0.06
118_M 127_V 0.62 0.06
162_H 71_R 0.61 0.06
161_Q 202_H 0.61 0.06
69_P 136_L 0.61 0.06
179_G 15_F 0.61 0.06
169_T 39_L 0.61 0.06
122_M 127_V 0.61 0.06
102_Q 95_V 0.61 0.06
70_C 153_L 0.60 0.06
34_Y 4_K 0.60 0.06
102_Q 67_N 0.60 0.06
201_A 116_G 0.60 0.06
82_A 108_R 0.60 0.06
150_I 186_L 0.60 0.06
153_R 10_D 0.60 0.06
122_M 79_G 0.60 0.06
105_E 50_I 0.60 0.06
72_V 151_L 0.60 0.06
76_A 114_L 0.60 0.06
109_L 176_P 0.60 0.06
69_P 28_G 0.59 0.06
34_Y 15_F 0.59 0.06
143_A 215_V 0.59 0.06
108_N 194_E 0.58 0.05
192_L 90_S 0.58 0.05
49_F 179_A 0.58 0.05
90_G 112_A 0.58 0.05
85_F 76_S 0.58 0.05
97_V 37_E 0.58 0.05
153_R 6_M 0.57 0.05
186_I 10_D 0.57 0.05
127_D 125_T 0.57 0.05
183_L 39_L 0.57 0.05
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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