| UniProt: | P76459 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11670 | ||
| Length: | 216 (213) | ||
| Sequences: | 1518 | ||
| Seq/Len: | 7.13 |
| ATOA
Paralog alert: 0.43 [within 20: 0.01] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 152_R | 200_E | 4.036 | 1.00 | |
| 104_D | 108_N | 3.662 | 1.00 | |
| 80_D | 83_M | 3.478 | 1.00 | |
| 143_A | 147_S | 3.385 | 1.00 | |
| 166_M | 175_R | 3.384 | 1.00 | |
| 193_A | 197_A | 3.352 | 1.00 | |
| 174_F | 203_F | 3.331 | 1.00 | |
| 105_E | 152_R | 3.28 | 1.00 | |
| 150_I | 181_M | 2.904 | 1.00 | |
| 177_I | 180_K | 2.764 | 1.00 | |
| 183_L | 205_V | 2.607 | 1.00 | |
| 186_I | 192_L | 2.574 | 1.00 | |
| 175_R | 184_T | 2.482 | 1.00 | |
| 186_I | 195_V | 2.417 | 1.00 | |
| 55_V | 68_Q | 2.41 | 1.00 | |
| 194_T | 198_K | 2.392 | 1.00 | |
| 177_I | 182_W | 2.384 | 1.00 | |
| 176_F | 181_M | 2.297 | 1.00 | |
| 72_V | 78_M | 2.213 | 1.00 | |
| 206_A | 209_L | 2.208 | 1.00 | |
| 171_L | 190_C | 2.181 | 1.00 | |
| 72_V | 76_A | 2.164 | 1.00 | |
| 171_L | 198_K | 2.11 | 1.00 | |
| 183_L | 192_L | 2.093 | 1.00 | |
| 167_L | 176_F | 2.076 | 1.00 | |
| 106_E | 153_R | 2.028 | 1.00 | |
| 141_H | 199_T | 2.009 | 1.00 | |
| 10_R | 185_E | 2 | 1.00 | |
| 49_F | 72_V | 1.983 | 1.00 | |
| 192_L | 196_R | 1.978 | 1.00 | |
| 192_L | 205_V | 1.93 | 1.00 | |
| 11_V | 138_A | 1.928 | 1.00 | |
| 5_Q | 34_Y | 1.911 | 1.00 | |
| 182_W | 204_E | 1.837 | 1.00 | |
| 94_D | 133_R | 1.686 | 1.00 | |
| 16_R | 19_D | 1.678 | 1.00 | |
| 11_V | 168_V | 1.663 | 1.00 | |
| 7_I | 138_A | 1.634 | 1.00 | |
| 148_A | 200_E | 1.628 | 1.00 | |
| 19_D | 95_A | 1.608 | 1.00 | |
| 102_Q | 155_T | 1.606 | 1.00 | |
| 194_T | 197_A | 1.603 | 1.00 | |
| 152_R | 202_R | 1.581 | 1.00 | |
| 105_E | 202_R | 1.576 | 1.00 | |
| 150_I | 167_L | 1.57 | 1.00 | |
| 191_D | 194_T | 1.541 | 0.99 | |
| 11_V | 97_V | 1.536 | 0.99 | |
| 174_F | 196_R | 1.515 | 0.99 | |
| 31_V | 97_V | 1.493 | 0.99 | |
| 154_C | 158_L | 1.489 | 0.99 | |
| 193_A | 196_R | 1.386 | 0.99 | |
| 15_L | 31_V | 1.383 | 0.99 | |
| 54_P | 73_L | 1.365 | 0.99 | |
| 44_Q | 88_I | 1.357 | 0.98 | |
| 187_A | 190_C | 1.354 | 0.98 | |
| 56_T | 59_H | 1.313 | 0.98 | |
| 184_T | 206_A | 1.305 | 0.98 | |
| 196_R | 203_F | 1.299 | 0.98 | |
| 49_F | 52_L | 1.277 | 0.97 | |
| 102_Q | 151_L | 1.272 | 0.97 | |
| 182_W | 206_A | 1.267 | 0.97 | |
| 89_R | 127_D | 1.251 | 0.97 | |
| 14_E | 168_V | 1.235 | 0.97 | |
| 166_M | 184_T | 1.23 | 0.97 | |
| 32_A | 35_L | 1.227 | 0.97 | |
| 175_R | 182_W | 1.221 | 0.96 | |
| 102_Q | 148_A | 1.214 | 0.96 | |
| 167_L | 181_M | 1.206 | 0.96 | |
| 172_A | 195_V | 1.19 | 0.96 | |
| 183_L | 203_F | 1.186 | 0.96 | |
| 15_L | 21_V | 1.181 | 0.95 | |
| 142_C | 170_E | 1.181 | 0.95 | |
| 95_A | 136_I | 1.153 | 0.95 | |
| 196_R | 202_R | 1.151 | 0.95 | |
| 160_A | 163_A | 1.149 | 0.94 | |
| 183_L | 186_I | 1.141 | 0.94 | |
| 180_K | 204_E | 1.115 | 0.93 | |
| 6_R | 188_D | 1.114 | 0.93 | |
| 53_G | 56_T | 1.1 | 0.93 | |
| 40_H | 74_P | 1.085 | 0.92 | |
| 134_K | 166_M | 1.081 | 0.92 | |
| 173_V | 185_E | 1.081 | 0.92 | |
| 6_R | 9_R | 1.06 | 0.91 | |
| 3_A | 6_R | 1.042 | 0.90 | |
| 4_K | 30_M | 1.037 | 0.89 | |
| 100_G | 109_L | 1.035 | 0.89 | |
| 28_P | 99_G | 1.028 | 0.89 | |
| 158_L | 161_Q | 1.028 | 0.89 | |
| 171_L | 194_T | 1.024 | 0.89 | |
| 172_A | 203_F | 1.019 | 0.88 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1poiB | 2 | 0.9491 | 100 | 0.278 | Contact Map | 0.635 |
| 3k6mA | 4 | 1 | 100 | 0.285 | Contact Map | 0.847 |
| 4kgbA | 2 | 1 | 100 | 0.289 | Contact Map | 0.781 |
| 2ahuA | 4 | 0.9537 | 100 | 0.296 | Contact Map | 0.731 |
| 1xr4A | 2 | 0.9954 | 100 | 0.419 | Contact Map | 0.459 |
| 2hj0A | 2 | 0.9907 | 100 | 0.445 | Contact Map | 0.381 |
| 3gk7A | 2 | 1 | 100 | 0.468 | Contact Map | 0.403 |
| 3rrlB | 2 | 0.9444 | 100 | 0.484 | Contact Map | 0.815 |
| 3d3uA | 1 | 0.9769 | 100 | 0.489 | Contact Map | 0.462 |
| 3eh7A | 1 | 0.9352 | 100 | 0.513 | Contact Map | 0.439 |
Sequence Conservation (Image Generated using WebLogo v3)